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    hcxB hydroxycarboxylate dehydrogenase B [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945412, updated on 3-Dec-2024

    Summary

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    Official Symbol
    hcxB
    Official Full Name
    hydroxycarboxylate dehydrogenase B
    Primary source
    ECOCYC:EG11581
    Locus tag
    b0801
    See related
    ASAP:ABE-0002738
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0790; ybiC
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    Genomic context

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    Sequence:
    NC_000913.3 (836351..837436)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ATP-dependent DNA helicase DinG Neighboring gene nonspecific DNA-binding protein YbiB Neighboring gene ncRNA Neighboring gene protein YbiE Neighboring gene DUF1471 domain-containing protein YbiJ

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structural analysis of the rhlE gene of Escherichia coli. Ohmori H. Jpn J Genet, 1994 Feb. PMID 8037924
    2. Nontargeted in vitro metabolomics for high-throughput identification of novel enzymes in Escherichia coli. Sévin DC, et al. Nat Methods, 2017 Feb. PMID 27941785
    3. Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation. Lu P, et al. Nat Biotechnol, 2007 Jan. PMID 17187058
    4. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article
    5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables (R)-4-hydroxyphenyllactate dehydrogenase (NADP+) activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydroxyphenylpyruvate reductase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables hydroxyphenylpyruvate reductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hydroxycarboxylate dehydrogenase B
    NP_415322.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      836351..837436
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415322.1 hydroxycarboxylate dehydrogenase B [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415322.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6N8QU95, A0A8H9T1R5
      Conserved Domains (1) summary
      PRK10098
      Location:1 → 351
      PRK10098; putative dehydrogenase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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