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    trpR DNA-binding transcriptional repressor TrpR [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948917, updated on 3-Dec-2024

    Summary

    Official Symbol
    trpR
    Official Full Name
    DNA-binding transcriptional repressor TrpR
    Primary source
    ECOCYC:EG11029
    Locus tag
    b4393
    See related
    ASAP:ABE-0014408
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4385; rtrY
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    Genomic context

    Sequence:
    NC_000913.3 (4632760..4633086)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene energy-dependent translational throttle protein EttA Neighboring gene soluble lytic murein transglycosylase Neighboring gene inosine/xanthosine triphosphatase Neighboring gene putative phosphatase Neighboring gene DNA-binding transcriptional dual regulator Rob

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables sequence-specific DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    DNA-binding transcriptional repressor TrpR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4632760..4633086
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418810.1 DNA-binding transcriptional repressor TrpR [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418810.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2Y0NE33, A0A7U9QKC1, A0AAN4TX47, A0AAQ1TAG5
      Conserved Domains (1) summary
      COG2973
      Location:6108
      TrpR; Trp operon repressor [Transcription]