U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Hsd17b1 hydroxysteroid (17-beta) dehydrogenase 1 [ Mus musculus (house mouse) ]

    Gene ID: 15485, updated on 9-Dec-2024

    Summary

    Official Symbol
    Hsd17b1provided by MGI
    Official Full Name
    hydroxysteroid (17-beta) dehydrogenase 1provided by MGI
    Primary source
    MGI:MGI:105077
    See related
    Ensembl:ENSMUSG00000019301 AllianceGenome:MGI:105077
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    E2DH; 17HSDB1; Hsd17ba; 17beta-HSD
    Summary
    Enables 17-beta-hydroxysteroid dehydrogenase (NADP+) activity; estradiol 17-beta-dehydrogenase [NAD(P)+] activity; and testosterone dehydrogenase [NAD(P)+] activity. Involved in estrogen biosynthetic process and testosterone biosynthetic process. Acts upstream of or within several processes, including adipose tissue development; lysosome organization; and skeletal muscle tissue development. Predicted to be active in cytosol. Is expressed in several structures, including adrenal gland; reproductive system; spleen; submandibular gland; and trachea. Orthologous to human HSD17B1 (hydroxysteroid 17-beta dehydrogenase 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward ovary adult (RPKM 78.1) See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Hsd17b1 in Genome Data Viewer
    Location:
    11 D; 11 64.17 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (100968792..100972014)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (101077968..101081188)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene ATPase, H+ transporting, lysosomal V0 subunit A1 Neighboring gene microRNA 6928 Neighboring gene STARR-positive B cell enhancer ABC_E10714 Neighboring gene STARR-positive B cell enhancer ABC_E8456 Neighboring gene alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:100943626-100943809 Neighboring gene STARR-positive B cell enhancer ABC_E7065 Neighboring gene Coenzyme A synthase Neighboring gene proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein Neighboring gene MAX-like protein X

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables 17-beta-hydroxysteroid dehydrogenase (NADP+) activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables NADP binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables NADP+ binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables NADP+ binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables estradiol 17-beta-dehydrogenase [NAD(P)+] activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables estradiol 17-beta-dehydrogenase [NAD(P)+] activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables estradiol 17-beta-dehydrogenase [NAD(P)+] activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables estradiol binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables estradiol binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein homodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein homodimerization activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables small molecule binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables steroid binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables testosterone 17-beta-dehydrogenase (NADP+) activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables testosterone dehydrogenase (NAD+) activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables testosterone dehydrogenase (NAD+) activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables testosterone dehydrogenase [NAD(P)+] activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    17-beta-hydroxysteroid dehydrogenase type 1
    Names
    17-beta-HSD 1
    estradiol 17-beta-dehydrogenase 1
    NP_034605.1
    XP_006532360.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_010475.2NP_034605.1  17-beta-hydroxysteroid dehydrogenase type 1

      See identical proteins and their annotated locations for NP_034605.1

      Status: VALIDATED

      Source sequence(s)
      BE691221, X89627
      Consensus CDS
      CCDS25445.1
      UniProtKB/Swiss-Prot
      P51656
      UniProtKB/TrEMBL
      Q3UPP5, Q790P4
      Related
      ENSMUSP00000019445.6, ENSMUST00000019445.6
      Conserved Domains (2) summary
      pfam00106
      Location:5192
      adh_short; short chain dehydrogenase
      cl21454
      Location:4260
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      100968792..100972014
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006532297.3XP_006532360.1  17-beta-hydroxysteroid dehydrogenase type 1 isoform X1

      UniProtKB/TrEMBL
      Q3UPP5
      Conserved Domains (1) summary
      cl21454
      Location:4200
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins