U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yhiJ DUF4049 domain-containing protein YhiJ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948001, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yhiJ
    Official Full Name
    DUF4049 domain-containing protein YhiJ
    Primary source
    ECOCYC:EG12225
    Locus tag
    b3488
    See related
    ASAP:ABE-0011387
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3473
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (3630968..3632590, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ribosome-associated ATPase Neighboring gene putative membrane fusion protein YhiI Neighboring gene protein YhiY Neighboring gene pseudo Neighboring gene inner membrane protein YhiM

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Gap-filling analysis of the iJO1366 Escherichia coli metabolic network reconstruction for discovery of metabolic functions. Orth JD, et al. BMC Syst Biol, 2012 May 1. PMID 22548736, Free PMC Article
    2. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article
    3. Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation. Lu P, et al. Nat Biotechnol, 2007 Jan. PMID 17187058
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within inositol catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    DUF4049 domain-containing protein YhiJ

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3630968..3632590 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417945.1 DUF4049 domain-containing protein YhiJ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417945.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376MK88
      Conserved Domains (1) summary
      pfam13258
      Location:194 → 503
      DUF4049; Domain of unknown function (DUF4049)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.