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    attf-4 AT hook-containing protein attf-4 [ Caenorhabditis elegans ]

    Gene ID: 175858, updated on 9-Dec-2024

    Summary

    Official Symbol
    attf-4
    Official Full Name
    AT hook-containing protein attf-4
    Primary source
    WormBase:WBGene00015477
    Locus tag
    CELE_C05D10.1
    See related
    AllianceGenome:WB:WBGene00015477
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA binding activity. Is expressed in several structures, including head; intestine; pharyngeal-intestinal valve; tail neurons; and ventral nerve cord. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See attf-4 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    6
    Sequence:
    Chromosome: III; NC_003281.10 (6080563..6084748)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Mitogen-activated protein kinase 15 Neighboring gene ABC transporter ATP-binding protein/permease wht-1 Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    AT hook-containing protein attf-4
    NP_001367434.1
    • Confirmed by transcript evidence
    NP_001367435.1
    • Confirmed by transcript evidence
    NP_741168.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      6080563..6084748
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_171147.7NP_741168.1  AT hook-containing protein attf-4 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741168.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      H2KYG7, Q11178, Q5TYM0
    2. NM_001379741.2NP_001367434.1  AT hook-containing protein attf-4 [Caenorhabditis elegans]

      Status: REVIEWED

    3. NM_001379742.1NP_001367435.1  AT hook-containing protein attf-4 [Caenorhabditis elegans]

      Status: REVIEWED

      Conserved Domains (1) summary
      PHA03247
      Location:105217
      PHA03247; large tegument protein UL36; Provisional