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    cmt-1 Protein cmt-1 [ Caenorhabditis elegans ]

    Gene ID: 172046, updated on 18-Sep-2024

    Summary

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    Official Symbol
    cmt-1
    Official Full Name
    Protein cmt-1
    Primary source
    WormBase:WBGene00016564
    Locus tag
    CELE_C41D11.5
    See related
    AllianceGenome:WB:WBGene00016564
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See cmt-1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    5
    Sequence:
    Chromosome: I; NC_003279.8 (4449879..4450927, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Eukaryotic translation initiation factor 3 subunit H Neighboring gene Endonuclease G, mitochondrial Neighboring gene TM2 domain-containing protein C41D11.9 Neighboring gene Enhanced RNAI (RNA interference) Neighboring gene Enhanced RNAI (RNA interference) Neighboring gene DNA2/NAM7 helicase helicase domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PCH-2 collaborates with CMT-1 to proofread meiotic homolog interactions. Giacopazzi S, et al. PLoS Genet, 2020 Jul. PMID 32730253, Free PMC Article
    2. The conserved AAA-ATPase PCH-2 (TRIP13) regulates spindle checkpoint strength. Défachelles L, et al. Mol Biol Cell, 2020 Sep 15. PMID 32697629, Free PMC Article
    3. TRIP13PCH-2 promotes Mad2 localization to unattached kinetochores in the spindle checkpoint response. Nelson CR, et al. J Cell Biol, 2015 Nov 9. PMID 26527744, Free PMC Article
    4. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. PCH-2 collaborates with CMT-1 to proofread meiotic homolog interactions.
      Title: PCH-2 collaborates with CMT-1 to proofread meiotic homolog interactions.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Protein cmt-1
    NP_491373.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      4449879..4450927 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_058972.4 → NP_491373.1  Protein cmt-1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491373.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O01975
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O01975.2

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