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    ogr-2 SPK domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 174566, updated on 9-Dec-2024

    Summary

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    Official Symbol
    ogr-2
    Official Full Name
    SPK domain-containing protein
    Primary source
    WormBase:WBGene00009946
    Locus tag
    CELE_F52H3.4
    See related
    AllianceGenome:WB:WBGene00009946
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in gonad. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See ogr-2 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (10041134..10042513)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat protein 36 Neighboring gene Protein MTO1 homolog, mitochondrial Neighboring gene Procollagen-lysine,2-oxoglutarate 5-dioxygenase Neighboring gene BTB and MATH domain-containing protein 38 Neighboring gene Uncharacterized protein Neighboring gene FMRF-Like Peptide

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Male-specific roles of lincRNA in C. elegans fertility. Shabtai R, et al. Front Cell Dev Biol, 2023. PMID 37035238, Free PMC Article
    2. Oocyte aging is controlled by mitogen-activated protein kinase signaling. Achache H, et al. Aging Cell, 2021 Jun. PMID 34061407, Free PMC Article
    3. Progression of Meiosis Is Coordinated by the Level and Location of MAPK Activation Via OGR-2 in Caenorhabditis elegans. Achache H, et al. Genetics, 2019 May. PMID 30867196, Free PMC Article
    4. WormGender - Open-Source Software for Automatic Caenorhabditis elegans Sex Ratio Measurement. Labocha MK, et al. PLoS One, 2015. PMID 26421844, Free PMC Article
    5. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. OGR-2 modulates the expression of lip-1 to promote the timely progression of meiosis through MPK-1 spatial deactivation.
      Title: Progression of Meiosis Is Coordinated by the Level and Location of MAPK Activation Via OGR-2 in Caenorhabditis elegans.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    General protein information

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    Preferred Names
    SPK domain-containing protein
    NP_496171.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      10041134..10042513
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063770.6 → NP_496171.2  SPK domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496171.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20682
      Conserved Domains (1) summary
      cl11619
      Location:3 → 49
      SPK; Domain of unknown function (DUF545)
    Nucleotide Protein
    Heading Accession and Version

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