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    Y47G6A.7 Sugar phosphate transporter domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 171918, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y47G6A.7
    Official Full Name
    Sugar phosphate transporter domain-containing protein
    Primary source
    WormBase:WBGene00021637
    Locus tag
    CELE_Y47G6A.7
    See related
    AllianceGenome:WB:WBGene00021637
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable antiporter activity. Predicted to be involved in UDP-glucose transmembrane transport. Predicted to be located in membrane. Predicted to be active in cis-Golgi network and endoplasmic reticulum-Golgi intermediate compartment. Is expressed in several structures, including anal depressor muscle; excretory cell; intestine; nervous system; and reproductive system. Orthologous to human SLC35C2 (solute carrier family 35 member C2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y47G6A.7 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    7
    Sequence:
    Chromosome: I; NC_003279.8 (3502736..3508421)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Flap endonuclease 1 Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene Golgi phosphoprotein 3 homolog sauron Neighboring gene Histone acetyltransferase GCN5 Neighboring gene Peptidase M14 carboxypeptidase A domain-containing protein;ShKT domain-containing protein Neighboring gene 40S ribosomal protein S19-binding protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables antiporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in UDP-glucose transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cis-Golgi network IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in endoplasmic reticulum-Golgi intermediate compartment IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Sugar phosphate transporter domain-containing protein
    NP_001021769.1
    • Confirmed by transcript evidence
    NP_001021770.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      3502736..3508421
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001026599.5 → NP_001021770.1  Sugar phosphate transporter domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001021770.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6AW10
      Conserved Domains (1) summary
      COG0697
      Location:76 → 379
      RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]

    2. NM_001026598.8 → NP_001021769.1  Sugar phosphate transporter domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001021769.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N3S9
      Conserved Domains (1) summary
      COG0697
      Location:76 → 379
      RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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