ccep-290 uncharacterized protein [Caenorhabditis elegans] - Gene

Summary

Official Symbol: ccep-290
Official Full Name: uncharacterized protein
Primary source: WormBase:WBGene00021643
Locus tag: CELE_Y47G6A.17
See related: AllianceGenome:WB:WBGene00021643
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Involved in non-motile cilium assembly and protein localization to ciliary transition zone. Located in central cylinder. Is expressed in amphid neurons and phasmid neurons. [provided by Alliance of Genome Resources, Dec 2024]
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Chromosome I - NC_003279.8 Genomic Context describing neighboring genes

Go to nucleotide: Graphics FASTA GenBank

The predicted gene Y47G6A.17 encodes the key ciliopathy protein CEP290 in C. elegans.
Title: The ciliary transition zone functions in cell adhesion but is dispensable for axoneme assembly in C. elegans.

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Function	Evidence Code	Pubs
enables chromatin binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in mitotic chromosome condensation	IBA Inferred from Biological aspect of Ancestor more info
involved_in non-motile cilium assembly	IGI Inferred from Genetic Interaction more info	PubMed
involved_in non-motile cilium assembly	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in protein localization to ciliary transition zone	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in central cylinder	IDA Inferred from Direct Assay more info	PubMed
located_in chromatin	IBA Inferred from Biological aspect of Ancestor more info
located_in ciliary transition zone	IDA Inferred from Direct Assay more info	PubMed
is_active_in condensed chromosome	IBA Inferred from Biological aspect of Ancestor more info
part_of condensin complex	IBA Inferred from Biological aspect of Ancestor more info

NP_491170.3

Product from WormBase gene class ccep;
Partially confirmed by transcript evidence; C. elegans CEntrosomal Protein

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The following sections contain reference sequences that belong to a specific genome build. Explain