U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Y58A7A.1 Copper transport protein [ Caenorhabditis elegans ]

    Gene ID: 190381, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Y58A7A.1
    Official Full Name
    Copper transport protein
    Primary source
    WormBase:WBGene00021975
    Locus tag
    CELE_Y58A7A.1
    See related
    AllianceGenome:WB:WBGene00021975
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable copper ion transmembrane transporter activity. Predicted to be involved in copper ion transmembrane transport. Predicted to be located in membrane. Orthologous to human SLC31A1 (solute carrier family 31 member 1). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Y58A7A.1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (5067637..5069540, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Mitogen-activated protein kinase kinase kinase mlk-1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Venom peptide Neighboring gene IBR domain-containing protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables copper ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in copper ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in copper ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Copper transport protein
    NP_001256056.1
    • Confirmed by transcript evidence
    NP_001256057.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      5067637..5069540 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269127.5 → NP_001256056.1  Copper transport protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256056.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D6RYD3
      Conserved Domains (1) summary
      pfam04145
      Location:34 → 147
      Ctr; Ctr copper transporter family

    2. NM_001269128.3 → NP_001256057.1  Copper transport protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256057.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q966A8
      Conserved Domains (1) summary
      pfam04145
      Location:1 → 114
      Ctr; Ctr copper transporter family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools