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    M6.11 Galectin [ Caenorhabditis elegans ]

    Gene ID: 13219106, updated on 9-Dec-2024

    Summary

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    Official Symbol
    M6.11
    Official Full Name
    Galectin
    Primary source
    WormBase:WBGene00206478
    Locus tag
    CELE_M6.11
    See related
    AllianceGenome:WB:WBGene00206478
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable carbohydrate binding activity and galactoside binding activity. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See M6.11 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    3
    Sequence:
    Chromosome: X; NC_003284.9 (640684..641540, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Homeobox protein HEX homolog pha-2 Neighboring gene ncRNA Neighboring gene IF rod domain-containing protein;Intermediate Filament, C;Intermediate filament protein ifc-2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene LiPocalin-Related protein Neighboring gene RUN domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables carbohydrate binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables galactoside binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Galectin
    NP_001256974.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      640684..641540 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001270045.4 → NP_001256974.1  Galectin [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256974.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F5GU58
      Conserved Domains (1) summary
      cl00071
      Location:12 → 123
      GLECT; Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may ...
    Nucleotide Protein
    Heading Accession and Version

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