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    arrd-1 Arrestin C-terminal-like domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 173454, updated on 9-Dec-2024

    Summary

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    Official Symbol
    arrd-1
    Official Full Name
    Arrestin C-terminal-like domain-containing protein
    Primary source
    WormBase:WBGene00020205
    Locus tag
    CELE_T04B8.3
    See related
    AllianceGenome:WB:WBGene00020205
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in protein transport. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See arrd-1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_003280.10 (627505..628658)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene AA_permease domain-containing protein;Solute carrier family 12 member 9 Neighboring gene pseudo Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Endoplasmic reticulum stress pathway required for immune homeostasis is neurally controlled by arrestin-1. Singh V, et al. J Biol Chem, 2012 Sep 28. PMID 22875856, Free PMC Article
    2. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
    3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Endoplasmic reticulum stress pathway required for immune homeostasis is neurally controlled by arrestin-1
      Title: Endoplasmic reticulum stress pathway required for immune homeostasis is neurally controlled by arrestin-1.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Arrestin C-terminal-like domain-containing protein
    NP_001303790.1
    • Confirmed by transcript evidence
    NP_493774.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      627505..628658
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_061373.8 → NP_493774.2  Arrestin C-terminal-like domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493774.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O44847
      Conserved Domains (2) summary
      smart01017
      Location:147 → 269
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
      cl22903
      Location:8 → 122
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain

    2. NM_001316861.3 → NP_001303790.1  Arrestin C-terminal-like domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0M7RDW0
      Conserved Domains (1) summary
      smart01017
      Location:27 → 149
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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