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    C03H5.3 SRF-dependent transcription regulation-associated protein [ Caenorhabditis elegans ]

    Gene ID: 173427, updated on 18-Sep-2024

    Summary

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    Official Symbol
    C03H5.3
    Official Full Name
    SRF-dependent transcription regulation-associated protein
    Primary source
    WormBase:WBGene00015405
    Locus tag
    CELE_C03H5.3
    See related
    AllianceGenome:WB:WBGene00015405
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See C03H5.3 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (386088..387949)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class T Neighboring gene Seven TM Receptor Neighboring gene TPR_REGION domain-containing protein Neighboring gene UDP-N-acetylglucosamine/UDP-N-acetylgalactosaminetransporter nstp-4 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    SRF-dependent transcription regulation-associated protein
    NP_001300492.1
    • Confirmed by transcript evidence
    NP_493722.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      386088..387949
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_061321.6 → NP_493722.1  SRF-dependent transcription regulation-associated protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493722.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O16657

    2. NM_001313563.3 → NP_001300492.1  SRF-dependent transcription regulation-associated protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AWR8
    Nucleotide Protein
    Heading Accession and Version

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