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    grld-1 RRM domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 176827, updated on 9-Dec-2024

    Summary

    Official Symbol
    grld-1
    Official Full Name
    RRM domain-containing protein
    Primary source
    WormBase:WBGene00017929
    Locus tag
    CELE_F29C4.7
    See related
    AllianceGenome:WB:WBGene00017929
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable RNA binding activity. Located in nucleus. Is expressed in epithelial cell; lateral ganglion; muscle cell; and neurons. Orthologous to human RBM15 (RNA binding motif protein 15) and RBM15B (RNA binding motif protein 15B). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See grld-1 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    6
    Sequence:
    Chromosome: IV; NC_003282.8 (121797..125931, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene Cytoplasmic tRNA 2-thiolation protein 1 Neighboring gene ncRNA Neighboring gene Mitochondrial cytochrome c oxidase subunit VIc/VIIs domain-containing protein

    Interactions

    General gene information

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables RNA binding  
    enables nucleic acid binding  
    Component Evidence Code Pubs
    located_in intracellular membrane-bounded organelle  
    located_in nucleus PubMed 

    General protein information

    Preferred Names
    RRM domain-containing protein
    NP_741283.1
    • Confirmed by transcript evidence
    NP_741284.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      121797..125931 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_171237.8NP_741283.1  RRM domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741283.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KYB8
      Conserved Domains (3) summary
      cd12310
      Location:253324
      RRM3_Spen; RNA recognition motif 3 in the Spen (split end) protein family
      pfam07744
      Location:376482
      SPOC; SPOC domain
      cl17169
      Location:167246
      RRM_SF; RNA recognition motif (RRM) superfamily
    2. NM_171238.5NP_741284.1  RRM domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741284.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MXG5
      Conserved Domains (2) summary
      cd12310
      Location:253324
      RRM3_Spen; RNA recognition motif 3 in the Spen (split end) protein family
      cl17169
      Location:167246
      RRM_SF; RNA recognition motif (RRM) superfamily
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