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    gatY tagatose-1,6-bisphosphate aldolase 2 [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946636, updated on 3-Dec-2024

    Summary

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    Official Symbol
    gatY
    Official Full Name
    tagatose-1,6-bisphosphate aldolase 2
    Primary source
    ECOCYC:EG12419
    Locus tag
    b2096
    See related
    ASAP:ABE-0006938
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2089; yegF
    Summary
    GatY is down 6X during growth at 4C (enabled by Oleispira antarctica Cpn10/60 transgene). kbaY, gatY, fbaA and ydjI are paralogs. [More information is available at EcoGene: EG12419].
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    Genomic context

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    Sequence:
    NC_000913.3 (2176350..2177204, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene galactitol-specific PTS enzyme IIA component Neighboring gene putative tagatose-1,6-bisphosphate aldolase 2 chaperone Neighboring gene fructose-bisphosphate aldolase class I Neighboring gene putative transporter YegT Neighboring gene putative ADP-ribosylglycohydrolase YegU

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of in vivo substrates of the chaperonin GroEL. Houry WA, et al. Nature, 1999 Nov 11. PMID 10647006
    2. The universal stress protein paralogues of Escherichia coli are co-ordinately regulated and co-operate in the defence against DNA damage. Gustavsson N, et al. Mol Microbiol, 2002 Jan. PMID 11849540
    3. Acid- and base-induced proteins during aerobic and anaerobic growth of Escherichia coli revealed by two-dimensional gel electrophoresis. Blankenhorn D, et al. J Bacteriol, 1999 Apr. PMID 10094700, Free PMC Article
    4. A proteomic approach to study msDNA function in Escherichia coli. Jeong MA, et al. J Microbiol, 2004 Sep. PMID 15459648
    5. Sequence of the gat operon for galactitol utilization from a wild-type strain EC3132 of Escherichia coli. Nobelmann B, et al. Biochim Biophys Acta, 1995 May 17. PMID 7772602

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on complete protein
      Title: Acid- and base-induced proteins during aerobic and anaerobic growth of Escherichia coli revealed by two-dimensional gel electrophoresis.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables tagatose-bisphosphate aldolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables tagatose-bisphosphate aldolase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables tagatose-bisphosphate aldolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in D-tagatose 6-phosphate catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in D-tagatose 6-phosphate catabolic process NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within galactitol catabolic process EXP
    Inferred from Experiment
    more info
    		 PubMed 
    involved_in galactitol catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in galactitol metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of catalytic complex NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    tagatose-1,6-bisphosphate aldolase 2
    NP_416599.2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2176350..2177204 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416599.2 tagatose-1,6-bisphosphate aldolase 2 [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416599.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X7B5N8
      Conserved Domains (1) summary
      PRK09195
      Location:1 → 284
      gatY; tagatose-bisphosphate aldolase; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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