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    citF citrate lyase alpha subunit [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945230, updated on 17-Dec-2024

    Summary

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    Official Symbol
    citF
    Official Full Name
    citrate lyase alpha subunit
    Primary source
    ECOCYC:G6341
    Locus tag
    b0615
    See related
    ASAP:ABE-0002119
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0608; ybdV
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    Genomic context

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    Sequence:
    NC_000913.3 (648039..649571, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene citrate:succinate antiporter Neighboring gene triphosphoribosyl-dephospho-CoA synthase Neighboring gene apo-citrate lyase phosphoribosyl-dephospho-CoA transferase Neighboring gene citrate lyase beta subunit Neighboring gene citrate lyase acyl carrier protein Neighboring gene citrate lyase synthetase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Reevaluation of citrate lyase from Escherichia coli. Quentmeier A, et al. Biochim Biophys Acta, 1987 May 27. PMID 3555623
    2. NetPhosBac - a predictor for Ser/Thr phosphorylation sites in bacterial proteins. Miller ML, et al. Proteomics, 2009 Jan. PMID 19053140
    3. CORRELATION OF CITRATE UTILIZATION BY MEMBERS OF THE COLON-AEROGENES GROUP WITH OTHER DIFFERENTIAL CHARACTERISTICS AND WITH HABITAT. Koser SA. J Bacteriol, 1924 Jan. PMID 16559027, Free PMC Article
    4. Why a co-substrate is required for anaerobic growth of Escherichia coli on citrate. Lütgens M, et al. J Gen Microbiol, 1980 Jul. PMID 6997437
    5. SOS response induction by beta-lactams and bacterial defense against antibiotic lethality. Miller C, et al. Science, 2004 Sep 10. PMID 15308764

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables citrate (pro-3S)-lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables citrate CoA-transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in acetyl-CoA metabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in acetyl-CoA metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in citrate metabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ATP-independent citrate lyase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of ATP-independent citrate lyase complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    citrate lyase alpha subunit
    NP_415148.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      648039..649571 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415148.1 citrate lyase alpha subunit [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415148.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7EIK6, A0AAN3KNQ5
      Conserved Domains (1) summary
      COG3051
      Location:1 → 510
      CitF; Citrate lyase, alpha subunit [Energy production and conversion]
    Nucleotide Protein
    Heading Accession and Version

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