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    ycjQ D-guloside 3-dehydrogenase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945971, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ycjQ
    Official Full Name
    D-guloside 3-dehydrogenase
    Primary source
    ECOCYC:G6651
    Locus tag
    b1313
    See related
    ASAP:ABE-0004412
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1308
    Summary
    Part of the putative ycjM-V operon, which encodes a putative transport and catabolism system for an unknown sugar. [More information is available at EcoGene: EG13914].
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    Genomic context

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    Sequence:
    NC_000913.3 (1374963..1376015)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative ABC transporter periplasmic binding protein YcjN Neighboring gene putative ABC transporter membrane subunit YcjO Neighboring gene putative ABC transporter membrane subunit YcjP Neighboring gene 3-dehydro-D-guloside 4-epimerase Neighboring gene D-glucoside 3-dehydrogenase Neighboring gene kojibiose phosphorylase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional Characterization of the ycjQRS Gene Cluster from Escherichia coli: A Novel Pathway for the Transformation of d-Gulosides to d-Glucosides. Mukherjee K, et al. Biochemistry, 2019 Mar 12. PMID 30742415, Free PMC Article
    2. A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map. Aiba H, et al. DNA Res, 1996 Dec 31. PMID 9097039
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables zinc ion binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    D-guloside 3-dehydrogenase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1374963..1376015
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415829.1 D-guloside 3-dehydrogenase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415829.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2H4TLN5
      Conserved Domains (1) summary
      cd08255
      Location:79 → 350
      2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_; 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members
    Nucleotide Protein
    Heading Accession and Version

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