U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yebB putative papain-like amidase YebB [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946377, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yebB
    Official Full Name
    putative papain-like amidase YebB
    Primary source
    ECOCYC:EG11136
    Locus tag
    b1862
    See related
    ASAP:ABE-0006213
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1863
    Summary
    YebB and YiiX are paralogs. [More information is available at EcoGene: EG11136].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (1946251..1946853)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene Holliday junction branch migration complex subunit RuvA Neighboring gene uncharacterized protein YobI Neighboring gene crossover junction endodeoxyribonuclease RuvC Neighboring gene putative transcriptional regulator YebC

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Resolution of Holliday junctions in Escherichia coli: identification of the ruvC gene product as a 19-kilodalton protein. Sharples GJ, et al. J Bacteriol, 1991 Dec. PMID 1657895, Free PMC Article
    2. Molecular analysis of the Escherichia coli ruvC gene, which encodes a Holliday junction-specific endonuclease. Takahagi M, et al. J Bacteriol, 1991 Sep. PMID 1885548, Free PMC Article
    3. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative papain-like amidase YebB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1946251..1946853
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416376.2 putative papain-like amidase YebB [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416376.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376S8B0
      Conserved Domains (1) summary
      PRK11470
      Location:1 → 200
      PRK11470; YebB family permuted papain-like enzyme
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.