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    rplQ 50S ribosomal subunit protein L17 [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947784, updated on 3-Dec-2024

    Summary

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    Official Symbol
    rplQ
    Official Full Name
    50S ribosomal subunit protein L17
    Primary source
    ECOCYC:EG10878
    Locus tag
    b3294
    See related
    ASAP:ABE-0010799
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3281
    Summary
    The L17 protein is a component of the 50S subunit of the ribosome. [More information is available at EcoCyc: EG10878].
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    Genomic context

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    Sequence:
    NC_000913.3 (3439616..3439999, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional activator ZntR Neighboring gene DUF1992 domain-containing protein YhdN Neighboring gene RNA polymerase subunit alpha Neighboring gene 30S ribosomal subunit protein S4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mutations to Less-Preferred Synonymous Codons in a Highly Expressed Gene of Escherichia coli: Fitness and Epistatic Interactions. Hauber DJ, et al. PLoS One, 2016. PMID 26727272, Free PMC Article
    2. A quaternary complex consisting of two molecules of tRNA and ribosomal proteins L2 and L17. Metspalu E, et al. FEBS Lett, 1981 Sep 14. PMID 6170527
    3. A peptide deformylase-ribosome complex reveals mechanism of nascent chain processing. Bingel-Erlenmeyer R, et al. Nature, 2008 Mar 6. PMID 18288106
    4. Transcriptional organization of the S10, spc and alpha operons of Escherichia coli. Lindahl L, et al. Biochim Biophys Acta, 1990 Aug 27. PMID 2207163
    5. Identification of a gene for the alpha-subunit of RNA polymerase at the str-spc region of the Escherichia coli chromosome. Jaskunas SR, et al. Proc Natl Acad Sci U S A, 1975 Dec. PMID 1108010, Free PMC Article

    See all (32) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Several synonymous mutations confer strong selective disadvantage. Negative, synergistic epistasis occurs when all 5 synonymous mutations are introduced together as a single allele.
      Title: Mutations to Less-Preferred Synonymous Codons in a Highly Expressed Gene of Escherichia coli: Fitness and Epistatic Interactions.
    2. N-terminus verified by Edman degradation on complete protein
      Title: A method for the chemical generation of N-terminal peptide sequence tags for rapid protein identification.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cytoplasmic translation NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in ribosomal large subunit assembly IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic large ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of cytosolic large ribosomal subunit IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    50S ribosomal subunit protein L17

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3439616..3439999 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417753.1 50S ribosomal subunit protein L17 [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417753.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S0FJK6, A0A8S7CUB8
      Conserved Domains (1) summary
      PRK05591
      Location:4 → 116
      rplQ; 50S ribosomal protein L17; Validated
    Nucleotide Protein
    Heading Accession and Version

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