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    yjdI PF06902 family protein YjdI [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948648, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yjdI
    Official Full Name
    PF06902 family protein YjdI
    Primary source
    ECOCYC:G7828
    Locus tag
    b4126
    See related
    ASAP:ABE-0013513
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4119
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    Genomic context

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    Sequence:
    NC_000913.3 (4351843..4352073)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene anaerobic C4-dicarboxylate transporter DcuB Neighboring gene DNA-binding transcriptional activator DcuR Neighboring gene sensor histidine kinase DcuS Neighboring gene putative N-acetyltransferase YjdJ Neighboring gene antitoxin of the GhoTS toxin-antitoxin system

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
    2. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    PF06902 family protein YjdI

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4351843..4352073
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418550.1 PF06902 family protein YjdI [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418550.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1MXF8, A0A8S7P3E6
      Conserved Domains (1) summary
      COG3592
      Location:3 → 76
      YjdI; Uncharacterized Fe-S cluster protein YjdI [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

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