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    Mrpl54 mitochondrial ribosomal protein L54 [ Mus musculus (house mouse) ]

    Gene ID: 66047, updated on 9-Dec-2024

    Summary

    Official Symbol
    Mrpl54provided by MGI
    Official Full Name
    mitochondrial ribosomal protein L54provided by MGI
    Primary source
    MGI:MGI:1913297
    See related
    Ensembl:ENSMUSG00000034932 AllianceGenome:MGI:1913297
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    D10Sut1e; 0610008M19Rik
    Summary
    Predicted to be a structural constituent of ribosome. Located in mitochondrion. Is expressed in several structures, including brain; brown fat; early conceptus; gonad; and skeleton. Orthologous to human MRPL54 (mitochondrial ribosomal protein L54). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in adrenal adult (RPKM 88.5), duodenum adult (RPKM 73.2) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Mrpl54 in Genome Data Viewer
    Location:
    10 C1; 10 39.72 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (81100556..81102760, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (81264722..81266926, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene zinc finger RNA binding protein 2 Neighboring gene megakaryocyte-associated tyrosine kinase Neighboring gene STARR-positive B cell enhancer ABC_E6886 Neighboring gene amyloid beta precursor protein binding family A member 3 Neighboring gene microRNA 3057 Neighboring gene tight junction protein 3 Neighboring gene STARR-seq mESC enhancer starr_27326

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in mitochondrial translation NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane NAS
    Non-traceable Author Statement
    more info
    PubMed 
    part_of mitochondrial large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of mitochondrial large ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
     
    part_of mitochondrial large ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of mitochondrial large ribosomal subunit NAS
    Non-traceable Author Statement
    more info
    PubMed 
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    large ribosomal subunit protein mL54
    Names
    39S ribosomal protein L54, mitochondrial
    L54mt
    MRP-L54

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025317.2NP_079593.1  large ribosomal subunit protein mL54 precursor

      See identical proteins and their annotated locations for NP_079593.1

      Status: PROVISIONAL

      Source sequence(s)
      AK003225
      Consensus CDS
      CCDS24049.1
      UniProtKB/Swiss-Prot
      Q9CPW3
      Related
      ENSMUSP00000039951.5, ENSMUST00000046114.5
      Conserved Domains (1) summary
      pfam08561
      Location:67130
      Ribosomal_L37; Mitochondrial ribosomal protein L37

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      81100556..81102760 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)