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    Mxi1 MAX interactor 1, dimerization protein [ Mus musculus (house mouse) ]

    Gene ID: 17859, updated on 9-Dec-2024

    Summary

    Official Symbol
    Mxi1provided by MGI
    Official Full Name
    MAX interactor 1, dimerization proteinprovided by MGI
    Primary source
    MGI:MGI:97245
    See related
    Ensembl:ENSMUSG00000025025 AllianceGenome:MGI:97245
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Mad2; Gm10197; bHLHc11
    Summary
    This gene encodes a protein containing a helix-loop-helix domain characteristic of transcription factors, which allows heterodimerization and sequence-specific DNA binding. The encoded protein is related to a family of Myc/Max/Mad proteins that are involved in the regulation of several cellular processes. The protein encoded by this gene is a transcriptional repressor thought to negatively regulate Myc function. Three alternatively spliced transcripts encoding different isoforms have been described. [provided by RefSeq, Jul 2008]
    Expression
    Ubiquitous expression in small intestine adult (RPKM 8.9), testis adult (RPKM 8.5) and 28 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Mxi1 in Genome Data Viewer
    Location:
    19 D2; 19 47.53 cM
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (53298509..53361724)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (53310128..53373293)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700001K23 gene Neighboring gene predicted gene, 36339 Neighboring gene STARR-seq mESC enhancer starr_46442 Neighboring gene STARR-positive B cell enhancer ABC_E783 Neighboring gene predicted gene, 30541 Neighboring gene STARR-seq mESC enhancer starr_46448 Neighboring gene survival motor neuron domain containing 1 Neighboring gene VISTA enhancer mm1351 Neighboring gene STARR-positive B cell enhancer ABC_E4292 Neighboring gene STARR-positive B cell enhancer ABC_E1980 Neighboring gene CapStarr-seq enhancer MGSCv37_chr19:53499127-53499376 Neighboring gene CapStarr-seq enhancer MGSCv37_chr19:53515061-53515299 Neighboring gene STARR-positive B cell enhancer ABC_E5711 Neighboring gene STARR-seq mESC enhancer starr_46454 Neighboring gene RIKEN cDNA 4833407H14 gene Neighboring gene STARR-seq mESC enhancer starr_46456 Neighboring gene myocardial infarction associated transcript 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (1)  1 citation

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    part_of RNA polymerase II transcription regulator complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001008542.3NP_001008542.2  max-interacting protein 1 isoform b

      See identical proteins and their annotated locations for NP_001008542.2

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2), also referred to as SRalpha, differs in the 5' UTR and 5' coding region, compared to variant 1. The resulting isoform (b) is longer and has a distinct N-terminus compared to isoform a.
      Source sequence(s)
      AC133451, BC064453
      Consensus CDS
      CCDS38022.1
      UniProtKB/TrEMBL
      Q3U3X2, Q6P2L3
      Related
      ENSMUSP00000003870.8, ENSMUST00000003870.15
      Conserved Domains (1) summary
      smart00353
      Location:140192
      HLH; helix loop helix domain
    2. NM_001008543.3NP_001008543.1  max-interacting protein 1 isoform c

      See identical proteins and their annotated locations for NP_001008543.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (3), also referred to as WR, differs in the 5' UTR and 5' coding region, compared to variant 1. The resulting isoform (c) is shorter and has a distinct N-terminus, compared to isoform a. This variant is supported by mRNAs and ESTs but the existence of the protein product has not been verified experimentally. Variants 3-6 encode the same protein.
      Source sequence(s)
      AC133451, L38821
      Consensus CDS
      CCDS38023.1
      UniProtKB/TrEMBL
      A0A494B9V1
      Related
      ENSMUSP00000158401.2, ENSMUST00000235201.2
      Conserved Domains (2) summary
      TIGR02169
      Location:75155
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd18930
      Location:32111
      bHLHzip_MXI1; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in Max-interacting protein 1 (MXI1) and similar proteins
    3. NM_001360345.1NP_001347274.1  max-interacting protein 1 isoform c

      Status: REVIEWED

      Description
      Transcript Variant: This variant (4) differs in the 5' UTR and 5' coding region, compared to variant 1. The resulting isoform (c) is shorter and has a distinct N-terminus, compared to isoform a. This variant is supported by mRNAs and ESTs but the existence of the protein product has not been verified experimentally. Variants 3-6 encode the same protein.
      Source sequence(s)
      AC133451
      Consensus CDS
      CCDS38023.1
      UniProtKB/TrEMBL
      A0A494B9V1
      Related
      ENSMUSP00000025998.9, ENSMUST00000025998.15
      Conserved Domains (2) summary
      TIGR02169
      Location:75155
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd18930
      Location:32111
      bHLHzip_MXI1; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in Max-interacting protein 1 (MXI1) and similar proteins
    4. NM_001360346.1NP_001347275.1  max-interacting protein 1 isoform c

      Status: REVIEWED

      Description
      Transcript Variant: This variant (5) differs in the 5' UTR and 5' coding region, compared to variant 1. The resulting isoform (c) is shorter and has a distinct N-terminus, compared to isoform a. This variant is supported by mRNAs and ESTs but the existence of the protein product has not been verified experimentally. Variants 3-6 encode the same protein.
      Source sequence(s)
      AC133451
      Consensus CDS
      CCDS38023.1
      UniProtKB/TrEMBL
      A0A494B9V1
      Conserved Domains (2) summary
      TIGR02169
      Location:75155
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd18930
      Location:32111
      bHLHzip_MXI1; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in Max-interacting protein 1 (MXI1) and similar proteins
    5. NM_001360347.1NP_001347276.1  max-interacting protein 1 isoform c

      Status: REVIEWED

      Description
      Transcript Variant: This variant (6) differs in the 5' UTR and 5' coding region, compared to variant 1. The resulting isoform (c) is shorter and has a distinct N-terminus, compared to isoform a. This variant is supported by mRNAs and ESTs but the existence of the protein product has not been verified experimentally. Variants 3-6 encode the same protein.
      Source sequence(s)
      AC133451
      Consensus CDS
      CCDS38023.1
      UniProtKB/TrEMBL
      A0A494B9V1
      Related
      ENSMUSP00000157400.2, ENSMUST00000236973.2
      Conserved Domains (2) summary
      TIGR02169
      Location:75155
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd18930
      Location:32111
      bHLHzip_MXI1; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in Max-interacting protein 1 (MXI1) and similar proteins
    6. NM_001360348.1NP_001347277.1  max-interacting protein 1 isoform d

      Status: REVIEWED

      Description
      Transcript Variant: This variant (7) differs in the 5' UTR and 5' coding region, compared to variant 1. The resulting isoform (d) is longer and has a distinct N-terminus, compared to isoform a.
      Source sequence(s)
      AC133451
      Conserved Domains (2) summary
      smart00353
      Location:80132
      HLH; helix loop helix domain
      cl25732
      Location:118198
      SMC_N; RecF/RecN/SMC N terminal domain
    7. NM_010847.4NP_034977.1  max-interacting protein 1 isoform a

      See identical proteins and their annotated locations for NP_034977.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1), also referred to as SRbeta, encodes the predominant isoform (a).
      Source sequence(s)
      AC133451, AK140465, CJ170779
      Consensus CDS
      CCDS29901.1
      UniProtKB/Swiss-Prot
      P50540
      UniProtKB/TrEMBL
      Q3USD3, Q6P2L3
      Related
      ENSMUSP00000107366.3, ENSMUST00000111737.3
      Conserved Domains (1) summary
      smart00353
      Location:73125
      HLH; helix loop helix domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      53298509..53361724
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006526735.5XP_006526798.1  max-interacting protein 1 isoform X1

      UniProtKB/TrEMBL
      Q6P2L3
      Conserved Domains (2) summary
      TIGR02169
      Location:168248
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cl00081
      Location:125204
      bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily
    2. XM_006526739.2XP_006526802.1  max-interacting protein 1 isoform X3

      See identical proteins and their annotated locations for XP_006526802.1

      UniProtKB/TrEMBL
      A0A494B9V1
      Related
      ENSMUSP00000157822.2, ENSMUST00000237480.2
      Conserved Domains (2) summary
      TIGR02169
      Location:75155
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd18930
      Location:32111
      bHLHzip_MXI1; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in Max-interacting protein 1 (MXI1) and similar proteins
    3. XM_030250763.1XP_030106623.1  max-interacting protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A494B9V1
      Conserved Domains (2) summary
      PRK00286
      Location:10186
      xseA; exodeoxyribonuclease VII large subunit; Reviewed
      cl00081
      Location:58137
      bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily
    4. XM_030250765.1XP_030106625.1  max-interacting protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A494B9V1
      Related
      ENSMUSP00000157790.2, ENSMUST00000235880.2
      Conserved Domains (2) summary
      TIGR02169
      Location:75155
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd18930
      Location:32111
      bHLHzip_MXI1; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in Max-interacting protein 1 (MXI1) and similar proteins
    5. XM_030250764.2XP_030106624.1  max-interacting protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A494B9V1
      Conserved Domains (2) summary
      TIGR02169
      Location:75155
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd18930
      Location:32111
      bHLHzip_MXI1; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in Max-interacting protein 1 (MXI1) and similar proteins