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    mRpL38 mitochondrial ribosomal protein L38 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32375, updated on 9-Dec-2024

    Summary

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    Official Symbol
    mRpL38provided by FlyBase
    Official Full Name
    mitochondrial ribosomal protein L38provided by FlyBase
    Primary source
    FLYBASE:FBgn0030552
    Locus tag
    Dmel_CG15871
    See related
    AllianceGenome:FB:FBgn0030552
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG15871; Dmel\CG15871; MRP-L3; mRpL3a
    Summary
    Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be part of mitochondrial large ribosomal subunit. Is expressed in adult head and adult heart. Orthologous to human MRPL38 (mitochondrial ribosomal protein L38). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See mRpL38 in Genome Data Viewer
    Location:
    12E5-12E5; 1-48 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (14226289..14227949)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (14120322..14121982)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene pre-mRNA processing factor 16 Neighboring gene lethal (1) G0469 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene F box and leucine-rich-repeat gene 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization, design, and function of the mitochondrial proteome: from organs to organisms. Lotz C, et al. J Proteome Res, 2014 Feb 7. PMID 24070373, Free PMC Article
    2. Structural compensation for the deficit of rRNA with proteins in the mammalian mitochondrial ribosome. Systematic analysis of protein components of the large ribosomal subunit from mammalian mitochondria. Suzuki T, et al. J Biol Chem, 2001 Jun 15. PMID 11279069
    3. Neutral Competition for Drosophila Follicle and Cyst Stem Cell Niches Requires Vesicle Trafficking Genes. Cook MS, et al. Genetics, 2017 Jul. PMID 28512187, Free PMC Article
    4. Large-scale identification of chemically induced mutations in Drosophila melanogaster. Haelterman NA, et al. Genome Res, 2014 Oct. PMID 25258387, Free PMC Article
    5. The genetic makeup of the Drosophila piRNA pathway. Handler D, et al. Mol Cell, 2013 Jun 6. PMID 23665231, Free PMC Article

    See all (31) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables structural constituent of ribosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial translation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mitochondrial large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of mitochondrial large ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    part_of mitochondrial large ribosomal subunit TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitochondrial ribosomal protein L38
    Names
    CG15871-PA
    mRpL38-PA
    mitochondrial ribosomal protein L3a

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      14226289..14227949
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078597.3 → NP_511152.2  mitochondrial ribosomal protein L38 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_511152.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SYF8, Q9VY48
      Related
      FBpp0073719
      Conserved Domains (1) summary
      cd00866
      Location:146 → 307
      PEBP_euk; PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in eukaryotes
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VY48 Q9VY48

    Gene LinkOut

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