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    asRNA:CR31845 antisense RNA:CR31845 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 12798199, updated on 11-Sep-2024

    Summary

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    Official Symbol
    asRNA:CR31845provided by FlyBase
    Official Full Name
    antisense RNA:CR31845provided by FlyBase
    Primary source
    FLYBASE:FBgn0051845
    Locus tag
    Dmel_CR31845
    See related
    AllianceGenome:FB:FBgn0051845
    Gene type
    ncRNA
    RNA name
    antisense_RNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG31845; CR31845; Dmel\CR31845
    Old locus tag
    Dmel_CG31845
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    Genomic context

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    See asRNA:CR31845 in Genome Data Viewer
    Location:
    34D1-34D1; 2-49 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (13777195..13778124)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (13777195..13778124)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45913 Neighboring gene long non-coding RNA:CR44846 Neighboring gene Transmembrane 9 superfamily protein member 4 Neighboring gene mir-968 stem loop Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR44847 Neighboring gene uncharacterized protein Neighboring gene p38b MAP kinase Neighboring gene Engulfment ABC Transporter in the ovary

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Double-stranded RNA is pathogenic in Drosophila models of expanded repeat neurodegenerative diseases. Lawlor KT, et al. Hum Mol Genet, 2011 Oct 1. PMID 21724553
    2. Genome features of "Dark-fly", a Drosophila line reared long-term in a dark environment. Izutsu M, et al. PLoS One, 2012. PMID 22432011, Free PMC Article
    3. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    4. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    5. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • asRNA:CR31845-RB; Dmel\asRNA:CR31845-RB; CR31845-RB; Dmel\CR31845-RB

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      13777195..13778124
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_047955.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials