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    lncRNA:CR43836 long non-coding RNA:CR43836 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 14462390, updated on 9-Dec-2024

    Summary

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    Official Symbol
    lncRNA:CR43836provided by FlyBase
    Official Full Name
    long non-coding RNA:CR43836provided by FlyBase
    Primary source
    FLYBASE:FBgn0264384
    Locus tag
    Dmel_CR43836
    See related
    AllianceGenome:FB:FBgn0264384
    Gene type
    ncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE29909; CR43836; Dmel\CR43836
    Summary
    Is expressed in embryonic hindgut; embryonic midgut chamber; embryonic proventriculus; larval visceral muscle cell; and organism. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See lncRNA:CR43836 in Genome Data Viewer
    Location:
    8C1-8C4; 1-26 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (8972908..9048991, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (8866941..8943024, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene retinal degeneration A Neighboring gene uncharacterized protein Neighboring gene mir-4964 stem loop Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene mir-31b stem loop Neighboring gene Nostrin Neighboring gene antisense RNA:CR45538 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Oviposition behaviour in Drosophila melanogaster: Genetic and behavioural decoupling between oviposition acceptance and preference for natural fruits. Fanara JJ, et al. J Evol Biol, 2023 Jan. PMID 36357966
    2. Diverse and pervasive subcellular distributions for both coding and long noncoding RNAs. Wilk R, et al. Genes Dev, 2016 Mar 1. PMID 26944682, Free PMC Article
    3. Comparative Expression Dynamics of Intergenic Long Noncoding RNAs in the Genus Drosophila. Nyberg KG, et al. Genome Biol Evol, 2016 Jun 27. PMID 27189981, Free PMC Article
    4. Expression-Based Cell Lineage Analysis in Drosophila Through a Course-Based Research Experience for Early Undergraduates. Olson JM, et al. G3 (Bethesda), 2019 Nov 5. PMID 31690598, Free PMC Article
    5. The genetic basis for variation in olfactory behavior in Drosophila melanogaster. Arya GH, et al. Chem Senses, 2015 May. PMID 25687947, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    • lncRNA:CR43836-RA; Dmel\lncRNA:CR43836-RA; CR43836-RA; Dmel\CR43836-RA
    • lncRNA:CR43836-RB; Dmel\lncRNA:CR43836-RB; CR43836-RB; Dmel\CR43836-RB
    • lncRNA:CR43836-RC; Dmel\lncRNA:CR43836-RC; CR43836-RC; Dmel\CR43836-RC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      8972908..9048991 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_073642.2 RNA Sequence

      Status: REVIEWED

    2. NR_073641.2 RNA Sequence

      Status: REVIEWED

    3. NR_073643.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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