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    CG17508 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 49893, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG17508provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039970
    Locus tag
    Dmel_CG17508
    See related
    AllianceGenome:FB:FBgn0039970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG17508
    Summary
    Predicted to be active in mitochondrion. Is expressed in adult head; embryonic/larval midgut; and organism. Orthologous to human FAM210B (family with sequence similarity 210 member B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG17508 in Genome Data Viewer
    Location:
    41F5-41F5; 2-55 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (5608635..5611586)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (1496140..1499091)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene UDP-glycosyltransferase family 50 member B3 Neighboring gene Troponin C isoform 4 Neighboring gene Fission, mitochondrial 1 Neighboring gene hermes Neighboring gene uncharacterized protein Neighboring gene CCR4-NOT transcription complex subunit 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identifying new players in structural synaptic plasticity through dArc1 interrogation. Xiao C, et al. iScience, 2023 Nov 17. PMID 37876812, Free PMC Article
    2. [Identification of C(2)M interacting proteins by yeast two-hybrid screening]. Yue SS, et al. Yi Chuan, 2015 Nov. PMID 26582530
    3. Genetic and bioinformatic analysis of 41C and the 2R heterochromatin of Drosophila melanogaster: a window on the heterochromatin-euchromatin junction. Myster SH, et al. Genetics, 2004 Feb. PMID 15020470, Free PMC Article
    4. Cytogenetic and molecular characterization of heterochromatin gene models in Drosophila melanogaster. Rossi F, et al. Genetics, 2007 Feb. PMID 17110485, Free PMC Article
    5. FISH analysis of Drosophila melanogaster heterochromatin using BACs and P elements. Corradini N, et al. Chromosoma, 2003 Jul. PMID 12827380

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    located_in mitochondrial outer membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG17508-PA
    CG17508-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      5608635..5611586
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143844.4 → NP_652101.2  uncharacterized protein Dmel_CG17508, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_652101.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z6G4, Q8SYU4
      Related
      FBpp0085407
      Conserved Domains (2) summary
      pfam06916
      Location:217 → 303
      DUF1279; Protein of unknown function (DUF1279)
      cl11961
      Location:113 → 160
      ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

    2. NM_001259212.2 → NP_001246141.1  uncharacterized protein Dmel_CG17508, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246141.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E3CTS2
      Conserved Domains (1) summary
      cl11961
      Location:113 → 160
      ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1Z6G4 A1Z6G4
    E3CTS2 E3CTS2
    Q8SYU4 Q8SYU4

    Gene LinkOut

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