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    lncRNA:cherub cherub [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 12797884, updated on 9-Dec-2024

    Summary

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    Official Symbol
    lncRNA:cherubprovided by FlyBase
    Official Full Name
    cherubprovided by FlyBase
    Primary source
    FLYBASE:FBgn0262972
    Locus tag
    Dmel_CR43283
    See related
    AllianceGenome:FB:FBgn0262972
    Gene type
    ncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CR43283; Dmel\CR43283; Dm_3R:37919; lincRNA.752; lncRNA:CR43283
    Summary
    Enables protein-macromolecule adaptor activity. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See lncRNA:cherub in Genome Data Viewer
    Location:
    86D9-86D9; 3-50 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (11247631..11256123, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (7073353..7081845, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR31386 Neighboring gene long noncoding RNA: testis-specific 25

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A gene expression atlas of embryonic neurogenesis in Drosophila reveals complex spatiotemporal regulation of lncRNAs. McCorkindale AL, et al. Development, 2019 Mar 28. PMID 30923056, Free PMC Article
    2. The asymmetrically segregating lncRNA cherub is required for transforming stem cells into malignant cells. Landskron L, et al. Elife, 2018 Mar 27. PMID 29580384, Free PMC Article
    3. Imp/IGF2BP levels modulate individual neural stem cell growth and division through myc mRNA stability. Samuels TJ, et al. Elife, 2020 Jan 14. PMID 31934860, Free PMC Article
    4. Single cell transcriptome atlas of the Drosophila larval brain. Brunet Avalos C, et al. Elife, 2019 Nov 20. PMID 31746739, Free PMC Article
    5. The molecular landscape of neural differentiation in the developing Drosophila brain revealed by targeted scRNA-seq and multi-informatic analysis. Michki NS, et al. Cell Rep, 2021 Apr 27. PMID 33909998, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    • alternate names: long non-coding RNA:CR43283
    • lncRNA:cherub-RA; Dmel\lncRNA:cherub-RA; CR43283-RA; Dmel\CR43283-RA
    • lncRNA:cherub-RB; Dmel\lncRNA:cherub-RB; CR43283-RB; Dmel\CR43283-RB
    • lncRNA:cherub-RC; Dmel\lncRNA:cherub-RC; CR43283-RC; Dmel\CR43283-RC

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables protein-macromolecule adaptor activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      11247631..11256123 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_048371.2 RNA Sequence

      Status: REVIEWED

    2. NR_125141.1 RNA Sequence

      Status: REVIEWED

    3. NR_048372.2 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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