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    MCU mitochondrial calcium uniporter [ Homo sapiens (human) ]

    Gene ID: 90550, updated on 10-Dec-2024

    Summary

    Official Symbol
    MCUprovided by HGNC
    Official Full Name
    mitochondrial calcium uniporterprovided by HGNC
    Primary source
    HGNC:HGNC:23526
    See related
    Ensembl:ENSG00000156026 MIM:614197; AllianceGenome:HGNC:23526
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    HsMCU; C10orf42; CCDC109A
    Summary
    Enables calcium channel activity; identical protein binding activity; and uniporter activity. Involved in several processes, including cellular response to calcium ion starvation; positive regulation of mitochondrial calcium ion concentration; and positive regulation of mitochondrial fission. Located in mitochondrion. Part of uniplex complex. Is active in mitochondrial inner membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in stomach (RPKM 19.3), colon (RPKM 14.7) and 24 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See MCU in Genome Data Viewer
    Location:
    10q22.1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (72692143..72887694)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (73563507..73759075)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (74451901..74647452)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene mitochondrial calcium uptake 1 Neighboring gene RNA, 7SL, cytoplasmic 840, pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:74385604-74386141 Neighboring gene high mobility group nucleosomal binding domain 2 pseudogene 34 Neighboring gene Sharpr-MPRA regulatory region 12193 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3551 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2476 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2477 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2478 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3552 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2479 Neighboring gene uncharacterized LOC124902450 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:74516687-74517186 Neighboring gene microRNA 4676 Neighboring gene Sharpr-MPRA regulatory region 7737 Neighboring gene Sharpr-MPRA regulatory region 6662 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:74658515-74658725 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3553 Neighboring gene Sharpr-MPRA regulatory region 12879 Neighboring gene uncharacterized LOC124902451 Neighboring gene nucleophosmin 1 pseudogene 24 Neighboring gene oncoprotein induced transcript 3 Neighboring gene phospholipase A2 group XIIB

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • FLJ46135

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables calcium channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables calcium channel activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables calcium channel activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables uniporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables uniporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables uniporter activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in calcium import into the mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in calcium import into the mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in calcium import into the mitochondrion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in calcium import into the mitochondrion NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in calcium-mediated signaling IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in cellular response to calcium ion starvation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in glucose homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in mitochondrial calcium ion homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mitochondrial calcium ion homeostasis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in mitochondrial calcium ion homeostasis NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in mitochondrial calcium ion transmembrane transport IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in mitochondrial calcium ion transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of insulin secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of mitochondrial calcium ion concentration IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of mitochondrial calcium ion concentration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of mitochondrial fission IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of neutrophil chemotaxis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in protein complex oligomerization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of calcium channel complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of calcium channel complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in mitochondrial inner membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in mitochondrial inner membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in mitochondrial inner membrane NAS
    Non-traceable Author Statement
    more info
    PubMed 
    located_in mitochondrial inner membrane TAS
    Traceable Author Statement
    more info
     
    located_in mitochondrion HTP PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
     
    part_of uniplex complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of uniplex complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of uniplex complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    part_of uniplex complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of uniplex complex NAS
    Non-traceable Author Statement
    more info
    PubMed 

    General protein information

    Preferred Names
    calcium uniporter protein, mitochondrial
    Names
    coiled-coil domain-containing protein 109A

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001270679.2NP_001257608.1  calcium uniporter protein, mitochondrial isoform 2 precursor

      See identical proteins and their annotated locations for NP_001257608.1

      Status: REVIEWED

      Source sequence(s)
      AC016542, AC069548
      Consensus CDS
      CCDS59218.1
      UniProtKB/Swiss-Prot
      Q8NE86
      Related
      ENSP00000349680.6, ENST00000357157.10
      Conserved Domains (1) summary
      pfam04678
      Location:117299
      MCU; Mitochondrial calcium uniporter
    2. NM_001270680.3NP_001257609.1  calcium uniporter protein, mitochondrial isoform 3

      See identical proteins and their annotated locations for NP_001257609.1

      Status: REVIEWED

      Source sequence(s)
      AC016542, AC069548
      Consensus CDS
      CCDS59219.1
      UniProtKB/Swiss-Prot
      Q8NE86
      Related
      ENSP00000440913.1, ENST00000536019.5
      Conserved Domains (1) summary
      pfam04678
      Location:69271
      MCU; Mitochondrial calcium uniporter
    3. NM_138357.3NP_612366.1  calcium uniporter protein, mitochondrial isoform 1 precursor

      See identical proteins and their annotated locations for NP_612366.1

      Status: REVIEWED

      Source sequence(s)
      AC016542, AC069548
      Consensus CDS
      CCDS7317.1
      UniProtKB/Swiss-Prot
      B2RDF3, B3KXV7, Q8NE86, Q96FL3
      Related
      ENSP00000362144.3, ENST00000373053.8
      Conserved Domains (1) summary
      pfam04678
      Location:118320
      MCU; Mitochondrial calcium uniporter

    RNA

    1. NR_073062.2 RNA Sequence

      Status: REVIEWED

      Description
      Transcript Variant: This variant (4) contains two alternate internal exons, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
      Source sequence(s)
      AK301475, BC010682, HY146050

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      72692143..72887694
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      73563507..73759075
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)