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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001194940.2 → NP_001181869.1 rho GTPase-activating protein 7 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC138593, AC158349, AC168051, BE199599, HM008381
- Consensus CDS
-
CCDS57617.1
- UniProtKB/TrEMBL
- D5M8I5, E9PXD2
- Related
- ENSMUSP00000132812.3, ENSMUST00000163663.3
- Conserved Domains (3) summary
-
- cd09591
Location:468 → 527
- SAM_DLC1; SAM domain of DLC1 subfamily
- cd04375
Location:1087 → 1305
- RhoGAP_DLC1; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of DLC1-like proteins. DLC1 shows in vitro GAP activity towards RhoA and CDC42. Beside its C-terminal GAP domain, DLC1 also contains a SAM (sterile alpha motif) and a START ...
- cl14643
Location:1330 → 1533
- SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily
-
NM_001194941.1 → NP_001181870.1 rho GTPase-activating protein 7 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (3) has a distinct N-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AC103378, AK147539, BE199599
- Consensus CDS
-
CCDS57616.1
- UniProtKB/Swiss-Prot
- Q3TRX3, Q3UH75, Q8R541, Q9R0Z9
- UniProtKB/TrEMBL
-
A0A0R4J171
- Related
- ENSMUSP00000096425.4, ENSMUST00000098826.10
- Conserved Domains (4) summary
-
- cd09591
Location:51 → 110
- SAM_DLC1; SAM domain of DLC1 subfamily
- smart00454
Location:51 → 110
- SAM; Sterile alpha motif
- cd04375
Location:670 → 888
- RhoGAP_DLC1; RhoGAP_DLC1: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of DLC1-like proteins. DLC1 shows in vitro GAP activity towards RhoA and CDC42. Beside its C-terminal GAP domain, DLC1 also contains a SAM (sterile alpha motif) and a ...
- cl14643
Location:913 → 1116
- SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily
-
NM_015802.3 → NP_056617.2 rho GTPase-activating protein 7 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (2) has a distinct N-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AC138593, AK147539, AK162413, BE199599
- Consensus CDS
-
CCDS40322.1
- UniProtKB/Swiss-Prot
- Q3TRX3, Q3UH75, Q8R541, Q9R0Z9
- UniProtKB/TrEMBL
-
E9QKB1
- Related
- ENSMUSP00000033923.8, ENSMUST00000033923.14
- Conserved Domains (4) summary
-
- cd09591
Location:17 → 76
- SAM_DLC1; SAM domain of DLC1 subfamily
- smart00454
Location:17 → 76
- SAM; Sterile alpha motif
- cd04375
Location:636 → 854
- RhoGAP_DLC1; RhoGAP_DLC1: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of DLC1-like proteins. DLC1 shows in vitro GAP activity towards RhoA and CDC42. Beside its C-terminal GAP domain, DLC1 also contains a SAM (sterile alpha motif) and a ...
- cl14643
Location:879 → 1082
- SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000074.7 Reference GRCm39 C57BL/6J
- Range
-
37034893..37420343 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006509166.5 → XP_006509229.1 rho GTPase-activating protein 7 isoform X1
- UniProtKB/TrEMBL
- D5M8I5, E9PXD2
- Conserved Domains (3) summary
-
- cd09591
Location:468 → 527
- SAM_DLC1; SAM domain of DLC1 subfamily
- cd04375
Location:1087 → 1305
- RhoGAP_DLC1; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of DLC1-like proteins. DLC1 shows in vitro GAP activity towards RhoA and CDC42. Beside its C-terminal GAP domain, DLC1 also contains a SAM (sterile alpha motif) and a START ...
- cl14643
Location:1330 → 1533
- SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily
-
XM_017312892.2 → XP_017168381.1 rho GTPase-activating protein 7 isoform X2
- UniProtKB/Swiss-Prot
- Q3TRX3, Q3UH75, Q8R541, Q9R0Z9
- Conserved Domains (2) summary
-
- cd04375
Location:562 → 780
- RhoGAP_DLC1; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of DLC1-like proteins. DLC1 shows in vitro GAP activity towards RhoA and CDC42. Beside its C-terminal GAP domain, DLC1 also contains a SAM (sterile alpha motif) and a START ...
- cl14643
Location:805 → 1008
- SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily
-
XM_011242152.4 → XP_011240454.1 rho GTPase-activating protein 7 isoform X5
- UniProtKB/TrEMBL
-
Q8C6U8
-
XM_036154159.1 → XP_036010052.1 rho GTPase-activating protein 7 isoform X4
- UniProtKB/TrEMBL
-
Q8C6U8
-
XM_006509167.5 → XP_006509230.1 rho GTPase-activating protein 7 isoform X3
- UniProtKB/TrEMBL
-
Q8C6U8
-
XM_011242153.4 → XP_011240455.1 rho GTPase-activating protein 7 isoform X6
- UniProtKB/TrEMBL
-
Q8C6U8
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_178735.3: Suppressed sequence
- Description
- NM_178735.3: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein, and the transcript retains intronic sequence at its 3' end.