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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001289606.1 → NP_001276535.1 bromodomain-containing protein 8 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the coding region, compared to variant 1. This results in a shorter isoform (2), compared to isoform 1.
- Source sequence(s)
-
AK032320, AK161689, AV322131, CD555707
- Consensus CDS
-
CCDS70879.1
- UniProtKB/Swiss-Prot
-
Q8R3B7
- Related
- ENSMUSP00000095229.4, ENSMUST00000097626.10
- Conserved Domains (1) summary
-
- cd05507
Location:709 → 812
- Bromo_brd8_like; Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be ...
-
NM_001289607.1 → NP_001276536.1 bromodomain-containing protein 8 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an alternate in-frame exon in the coding region, compared to variant 1. This results in a shorter isoform (3), compared to isoform 1.
- Source sequence(s)
-
AK032320, AK161689, AV322131, CD555707
- Consensus CDS
-
CCDS70880.1
- UniProtKB/TrEMBL
-
D3YZC7
- Related
- ENSMUSP00000111432.2, ENSMUST00000115766.8
- Conserved Domains (1) summary
-
- cd05507
Location:712 → 815
- Bromo_brd8_like; Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be ...
-
NM_001361136.1 → NP_001348065.1 bromodomain-containing protein 8 isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks an exon and its 3' terminal exon extends past a splice site that is used in variant 1. This results in a novel 3' coding region and 3' UTR, compared to variant 1. It encodes isoform 4 which is longer and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC074335
- Consensus CDS
-
CCDS89217.1
- UniProtKB/TrEMBL
-
D3YZC8
- Related
- ENSMUSP00000111431.2, ENSMUST00000115765.2
- Conserved Domains (2) summary
-
- cd05507
Location:782 → 885
- Bromo_brd8_like; Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be ...
- cl26464
Location:176 → 356
- Atrophin-1; Atrophin-1 family
-
NM_030147.3 → NP_084423.2 bromodomain-containing protein 8 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript.
- Source sequence(s)
-
AK032320, AK161689, AV322131, CD555707
- Consensus CDS
-
CCDS50248.1
- UniProtKB/Swiss-Prot
- Q3TSZ2, Q8C049, Q8R3B7, Q8R583, Q8VDP0
- Related
- ENSMUSP00000003876.4, ENSMUST00000003876.10
- Conserved Domains (1) summary
-
- cd05507
Location:782 → 885
- Bromo_brd8_like; Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000084.7 Reference GRCm39 C57BL/6J
- Range
-
34731668..34757916 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006526358.5 → XP_006526421.1 bromodomain-containing protein 8 isoform X1
- Conserved Domains (2) summary
-
- cd05507
Location:712 → 815
- Bromo_brd8_like; Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be ...
- pfam08493
Location:199 → 415
- AflR; Aflatoxin regulatory protein