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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001145520.1 → NP_001138992.1 ankycorbin isoform a
See identical proteins and their annotated locations for NP_001138992.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1-3 encode the same isoform (a).
- Source sequence(s)
-
AB037755, AF155135, AY317139
- Consensus CDS
-
CCDS34142.1
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
- Related
- ENSP00000388725.2, ENST00000428746.6
- Conserved Domains (7) summary
-
- PRK03918
Location:430 → 946
- PRK03918; chromosome segregation protein; Provisional
- cd00204
Location:81 → 205
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:123 → 215
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:23 → 73
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:118 → 149
- ANK; ANK repeat [structural motif]
- cl03075
Location:602 → 732
- GrpE; nucleotide exchange factor GrpE
- cl19219
Location:589 → 662
- DUF342; Protein of unknown function (DUF342)
-
NM_001145521.2 → NP_001138993.1 ankycorbin isoform a
See identical proteins and their annotated locations for NP_001138993.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1-3 encode the same isoform (a).
- Source sequence(s)
-
AF155135, AK308306, AY317139, BC028681, DB036130
- Consensus CDS
-
CCDS34142.1
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
- Related
- ENSP00000422942.1, ENST00000503673.5
- Conserved Domains (7) summary
-
- PRK03918
Location:430 → 946
- PRK03918; chromosome segregation protein; Provisional
- cd00204
Location:81 → 205
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:123 → 215
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:23 → 73
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:118 → 149
- ANK; ANK repeat [structural motif]
- cl03075
Location:602 → 732
- GrpE; nucleotide exchange factor GrpE
- cl19219
Location:589 → 662
- DUF342; Protein of unknown function (DUF342)
-
NM_001145522.2 → NP_001138994.1 ankycorbin isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks an alternate in-frame exon, compared to variant 1. This results in a shorter protein (isoform b), compared to isoform a.
- Source sequence(s)
-
AF155135, AK314379, DA485361, DN994273
- Consensus CDS
-
CCDS54837.1
- UniProtKB/Swiss-Prot
-
Q9P0K7
- Related
- ENSP00000422377.1, ENST00000512629.5
- Conserved Domains (4) summary
-
- PHA03095
Location:12 → 224
- PHA03095; ankyrin-like protein; Provisional
- PRK03918
Location:401 → 917
- PRK03918; DNA double-strand break repair ATPase Rad50
- sd00045
Location:118 → 149
- ANK; ANK repeat [structural motif]
- pfam12796
Location:90 → 182
- Ank_2; Ankyrin repeats (3 copies)
-
NM_001145523.2 → NP_001138995.1 ankycorbin isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR, uses an alternate 5' coding exon, and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (c) has a distinct N-terminus and is shorter than isoform a.
- Source sequence(s)
-
AF155135, AY317139, AY354204
- Consensus CDS
-
CCDS54838.1
- UniProtKB/Swiss-Prot
-
Q9P0K7
- Related
- ENSP00000423854.1, ENST00000506376.1
- Conserved Domains (4) summary
-
- PHA03095
Location:3 → 216
- PHA03095; ankyrin-like protein; Provisional
- PRK03918
Location:422 → 938
- PRK03918; DNA double-strand break repair ATPase Rad50
- sd00045
Location:110 → 141
- ANK; ANK repeat [structural motif]
- pfam12796
Location:82 → 174
- Ank_2; Ankyrin repeats (3 copies)
-
NM_001145525.2 → NP_001138997.1 ankycorbin isoform d
See identical proteins and their annotated locations for NP_001138997.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR, uses an alternate 5' coding exon, and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (d) has a distinct N-terminus and is longer than isoform a.
- Source sequence(s)
-
AF155135, AK308306, AY317139, DB036130
- Consensus CDS
-
CCDS54839.1
- UniProtKB/Swiss-Prot
-
Q9P0K7
- Related
- ENSP00000427123.1, ENST00000515799.5
- Conserved Domains (7) summary
-
- PRK03918
Location:433 → 949
- PRK03918; chromosome segregation protein; Provisional
- cd00204
Location:84 → 208
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:126 → 218
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:26 → 76
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:121 → 152
- ANK; ANK repeat [structural motif]
- cl03075
Location:605 → 735
- GrpE; nucleotide exchange factor GrpE
- cl19219
Location:592 → 665
- DUF342; Protein of unknown function (DUF342)
-
NM_015577.3 → NP_056392.2 ankycorbin isoform a
See identical proteins and their annotated locations for NP_056392.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the predominant isoform (a). Variants 1-3 encode the same isoform (a).
- Source sequence(s)
-
AF155135, BC028681, DA485361
- Consensus CDS
-
CCDS34142.1
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
- Related
- ENSP00000265109.3, ENST00000265109.8
- Conserved Domains (7) summary
-
- PRK03918
Location:430 → 946
- PRK03918; chromosome segregation protein; Provisional
- cd00204
Location:81 → 205
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:123 → 215
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:23 → 73
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:118 → 149
- ANK; ANK repeat [structural motif]
- cl03075
Location:602 → 732
- GrpE; nucleotide exchange factor GrpE
- cl19219
Location:589 → 662
- DUF342; Protein of unknown function (DUF342)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000005.10 Reference GRCh38.p14 Primary Assembly
- Range
-
34656328..34832612
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047417088.1 → XP_047273044.1 ankycorbin isoform X2
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
-
XM_047417092.1 → XP_047273048.1 ankycorbin isoform X6
- Conserved Domains (4) summary
-
- PHA03095
Location:12 → 224
- PHA03095; ankyrin-like protein; Provisional
- PRK03918
Location:401 → 917
- PRK03918; DNA double-strand break repair ATPase Rad50
- sd00045
Location:118 → 149
- ANK; ANK repeat [structural motif]
- pfam12796
Location:90 → 182
- Ank_2; Ankyrin repeats (3 copies)
-
XM_017009335.2 → XP_016864824.1 ankycorbin isoform X6
- UniProtKB/Swiss-Prot
-
Q9P0K7
- Conserved Domains (4) summary
-
- PHA03095
Location:12 → 224
- PHA03095; ankyrin-like protein; Provisional
- PRK03918
Location:401 → 917
- PRK03918; DNA double-strand break repair ATPase Rad50
- sd00045
Location:118 → 149
- ANK; ANK repeat [structural motif]
- pfam12796
Location:90 → 182
- Ank_2; Ankyrin repeats (3 copies)
-
XM_011514021.3 → XP_011512323.1 ankycorbin isoform X2
See identical proteins and their annotated locations for XP_011512323.1
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
- Conserved Domains (7) summary
-
- PRK03918
Location:430 → 946
- PRK03918; chromosome segregation protein; Provisional
- cd00204
Location:81 → 205
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:123 → 215
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:23 → 73
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:118 → 149
- ANK; ANK repeat [structural motif]
- cl03075
Location:602 → 732
- GrpE; nucleotide exchange factor GrpE
- cl19219
Location:589 → 662
- DUF342; Protein of unknown function (DUF342)
-
XM_047417091.1 → XP_047273047.1 ankycorbin isoform X6
- Conserved Domains (4) summary
-
- PHA03095
Location:12 → 224
- PHA03095; ankyrin-like protein; Provisional
- PRK03918
Location:401 → 917
- PRK03918; DNA double-strand break repair ATPase Rad50
- sd00045
Location:118 → 149
- ANK; ANK repeat [structural motif]
- pfam12796
Location:90 → 182
- Ank_2; Ankyrin repeats (3 copies)
-
XM_011514017.3 → XP_011512319.1 ankycorbin isoform X2
See identical proteins and their annotated locations for XP_011512319.1
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
- Conserved Domains (7) summary
-
- PRK03918
Location:430 → 946
- PRK03918; chromosome segregation protein; Provisional
- cd00204
Location:81 → 205
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:123 → 215
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:23 → 73
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:118 → 149
- ANK; ANK repeat [structural motif]
- cl03075
Location:602 → 732
- GrpE; nucleotide exchange factor GrpE
- cl19219
Location:589 → 662
- DUF342; Protein of unknown function (DUF342)
-
XM_011514019.2 → XP_011512321.1 ankycorbin isoform X2
See identical proteins and their annotated locations for XP_011512321.1
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
- Conserved Domains (7) summary
-
- PRK03918
Location:430 → 946
- PRK03918; chromosome segregation protein; Provisional
- cd00204
Location:81 → 205
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:123 → 215
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:23 → 73
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:118 → 149
- ANK; ANK repeat [structural motif]
- cl03075
Location:602 → 732
- GrpE; nucleotide exchange factor GrpE
- cl19219
Location:589 → 662
- DUF342; Protein of unknown function (DUF342)
-
XM_011514020.2 → XP_011512322.1 ankycorbin isoform X2
See identical proteins and their annotated locations for XP_011512322.1
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
- Conserved Domains (7) summary
-
- PRK03918
Location:430 → 946
- PRK03918; chromosome segregation protein; Provisional
- cd00204
Location:81 → 205
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:123 → 215
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:23 → 73
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:118 → 149
- ANK; ANK repeat [structural motif]
- cl03075
Location:602 → 732
- GrpE; nucleotide exchange factor GrpE
- cl19219
Location:589 → 662
- DUF342; Protein of unknown function (DUF342)
-
XM_011514018.2 → XP_011512320.1 ankycorbin isoform X2
See identical proteins and their annotated locations for XP_011512320.1
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
- Conserved Domains (7) summary
-
- PRK03918
Location:430 → 946
- PRK03918; chromosome segregation protein; Provisional
- cd00204
Location:81 → 205
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:123 → 215
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:23 → 73
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:118 → 149
- ANK; ANK repeat [structural motif]
- cl03075
Location:602 → 732
- GrpE; nucleotide exchange factor GrpE
- cl19219
Location:589 → 662
- DUF342; Protein of unknown function (DUF342)
-
XM_047417089.1 → XP_047273045.1 ankycorbin isoform X2
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
-
XM_006714469.3 → XP_006714532.1 ankycorbin isoform X2
See identical proteins and their annotated locations for XP_006714532.1
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
- Conserved Domains (7) summary
-
- PRK03918
Location:430 → 946
- PRK03918; chromosome segregation protein; Provisional
- cd00204
Location:81 → 205
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:123 → 215
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:23 → 73
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:118 → 149
- ANK; ANK repeat [structural motif]
- cl03075
Location:602 → 732
- GrpE; nucleotide exchange factor GrpE
- cl19219
Location:589 → 662
- DUF342; Protein of unknown function (DUF342)
-
XM_011514022.2 → XP_011512324.1 ankycorbin isoform X2
See identical proteins and their annotated locations for XP_011512324.1
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
- Conserved Domains (7) summary
-
- PRK03918
Location:430 → 946
- PRK03918; chromosome segregation protein; Provisional
- cd00204
Location:81 → 205
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:123 → 215
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:23 → 73
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:118 → 149
- ANK; ANK repeat [structural motif]
- cl03075
Location:602 → 732
- GrpE; nucleotide exchange factor GrpE
- cl19219
Location:589 → 662
- DUF342; Protein of unknown function (DUF342)
-
XM_047417090.1 → XP_047273046.1 ankycorbin isoform X5
-
XM_024446017.2 → XP_024301785.1 ankycorbin isoform X3
- Conserved Domains (5) summary
-
- cd00204
Location:73 → 197
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- sd00045
Location:110 → 141
- ANK; ANK repeat [structural motif]
- pfam12796
Location:181 → 240
- Ank_2; Ankyrin repeats (3 copies)
- pfam13857
Location:27 → 85
- Ank_5; Ankyrin repeats (many copies)
- cl25732
Location:422 → 938
- SMC_N; RecF/RecN/SMC N terminal domain
-
XM_011514016.3 → XP_011512318.2 ankycorbin isoform X1
-
XM_011514025.3 → XP_011512327.2 ankycorbin isoform X4
-
XM_047417093.1 → XP_047273049.1 ankycorbin isoform X7
- UniProtKB/TrEMBL
-
B4DNL3
Alternate T2T-CHM13v2.0
Genomic
-
NC_060929.1 Alternate T2T-CHM13v2.0
- Range
-
34903424..35079712
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054352339.1 → XP_054208314.1 ankycorbin isoform X2
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
-
XM_054352354.1 → XP_054208329.1 ankycorbin isoform X6
-
XM_054352352.1 → XP_054208327.1 ankycorbin isoform X6
-
XM_054352346.1 → XP_054208321.1 ankycorbin isoform X2
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
-
XM_054352353.1 → XP_054208328.1 ankycorbin isoform X6
-
XM_054352340.1 → XP_054208315.1 ankycorbin isoform X2
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
-
XM_054352345.1 → XP_054208320.1 ankycorbin isoform X2
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
-
XM_054352344.1 → XP_054208319.1 ankycorbin isoform X2
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
-
XM_054352343.1 → XP_054208318.1 ankycorbin isoform X2
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
-
XM_054352341.1 → XP_054208316.1 ankycorbin isoform X2
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
-
XM_054352347.1 → XP_054208322.1 ankycorbin isoform X2
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
-
XM_054352342.1 → XP_054208317.1 ankycorbin isoform X2
- UniProtKB/Swiss-Prot
- E9PED3, Q6V1W9, Q7Z5I4, Q7Z733, Q9P0K7, Q9P2L2, Q9Y3T5
-
XM_054352338.1 → XP_054208313.1 ankycorbin isoform X8
-
XM_054352351.1 → XP_054208326.1 ankycorbin isoform X5
-
XM_054352348.1 → XP_054208323.1 ankycorbin isoform X1
-
XM_054352349.1 → XP_054208324.1 ankycorbin isoform X3
-
XM_054352350.1 → XP_054208325.1 ankycorbin isoform X4
-
XM_054352355.1 → XP_054208330.1 ankycorbin isoform X7
- UniProtKB/TrEMBL
-
B4DNL3