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    SDAD1P1 SDA1 domain containing 1 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 157489, updated on 10-Dec-2024

    Summary

    Official Symbol
    SDAD1P1provided by HGNC
    Official Full Name
    SDA1 domain containing 1 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:31403
    See related
    Ensembl:ENSG00000293314 AllianceGenome:HGNC:31403
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See SDAD1P1 in Genome Data Viewer
    Location:
    8p21.2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (26379259..26382953, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (26655819..26659513, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (26236775..26240469, complement)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene matrix metallopeptidase 12 (macrophage elastase) pseudogene Neighboring gene Sharpr-MPRA regulatory region 858 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19038 Neighboring gene protein phosphatase 2 regulatory subunit Balpha Neighboring gene Sharpr-MPRA regulatory region 13890 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:26192157-26192656 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr8:26239047-26240246 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27126 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19039 Neighboring gene Sharpr-MPRA regulatory region 12075 Neighboring gene GATA motif-containing MPRA enhancer 260 Neighboring gene BCL2 interacting protein 3 like Neighboring gene Sharpr-MPRA regulatory region 1267 Neighboring gene DNAJB6 pseudogene 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_144550.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC022911, AW025729
      Related
      ENST00000519902.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      26379259..26382953 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      26655819..26659513 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)