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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_050624.2 RefSeqGene
- Range
-
5002..38172
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001318185.2 → NP_001305114.1 integrin alpha-D isoform 1 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC026471, AC093520
- UniProtKB/TrEMBL
-
Q59H14
- Conserved Domains (4) summary
-
- smart00191
Location:453 → 495
- Int_alpha; Integrin alpha (beta-propellor repeats)
- cd01469
Location:149 → 324
- vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
- pfam00357
Location:1125 → 1139
- Integrin_alpha; Integrin alpha cytoplasmic region
- pfam08441
Location:617 → 958
- Integrin_alpha2; Integrin alpha
-
NM_005353.3 → NP_005344.2 integrin alpha-D isoform 2 precursor
See identical proteins and their annotated locations for NP_005344.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) contains an alternate in-frame splice site in the 5' coding region, compared to variant 1. It encodes isoform 2, which is shorter by an amino acid, compared to isoform 1.
- Source sequence(s)
-
AC026471, AC093520
- Consensus CDS
-
CCDS32438.1
- UniProtKB/Swiss-Prot
- Q13349, Q15575, Q15576
- UniProtKB/TrEMBL
-
Q59H14
- Related
- ENSP00000373854.2, ENST00000389202.3
- Conserved Domains (4) summary
-
- smart00191
Location:453 → 509
- Int_alpha; Integrin alpha (beta-propellor repeats)
- cd01469
Location:149 → 324
- vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
- pfam00357
Location:1124 → 1138
- Integrin_alpha; Integrin alpha cytoplasmic region
- pfam08441
Location:616 → 957
- Integrin_alpha2; Integrin alpha
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000016.10 Reference GRCh38.p14 Primary Assembly
- Range
-
31393335..31426505
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011545835.4 → XP_011544137.1 integrin alpha-D isoform X1
- UniProtKB/TrEMBL
-
Q59H14
- Conserved Domains (4) summary
-
- smart00191
Location:464 → 506
- Int_alpha; Integrin alpha (beta-propellor repeats)
- cd01469
Location:149 → 324
- vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
- pfam00357
Location:1153 → 1167
- Integrin_alpha; Integrin alpha cytoplasmic region
- pfam08441
Location:628 → 933
- Integrin_alpha2; Integrin alpha
-
XM_017023215.3 → XP_016878704.1 integrin alpha-D isoform X6
- UniProtKB/TrEMBL
-
Q59H14
-
XM_011545839.3 → XP_011544141.1 integrin alpha-D isoform X5
- UniProtKB/TrEMBL
-
Q59H14
- Conserved Domains (4) summary
-
- smart00191
Location:464 → 506
- Int_alpha; Integrin alpha (beta-propellor repeats)
- cd01469
Location:149 → 324
- vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
- pfam00357
Location:1136 → 1150
- Integrin_alpha; Integrin alpha cytoplasmic region
- pfam08441
Location:628 → 969
- Integrin_alpha2; Integrin alpha
-
XM_011545837.3 → XP_011544139.1 integrin alpha-D isoform X3
- UniProtKB/TrEMBL
-
Q59H14
- Conserved Domains (4) summary
-
- smart00191
Location:464 → 506
- Int_alpha; Integrin alpha (beta-propellor repeats)
- cd01469
Location:149 → 324
- vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
- pfam00357
Location:1152 → 1166
- Integrin_alpha; Integrin alpha cytoplasmic region
- pfam08441
Location:628 → 932
- Integrin_alpha2; Integrin alpha
-
XM_011545844.4 → XP_011544146.1 integrin alpha-D isoform X11
- UniProtKB/TrEMBL
-
Q59H14
- Conserved Domains (3) summary
-
- smart00191
Location:464 → 506
- Int_alpha; Integrin alpha (beta-propellor repeats)
- cd01469
Location:149 → 324
- vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
- pfam00357
Location:961 → 975
- Integrin_alpha; Integrin alpha cytoplasmic region
-
XM_011545836.4 → XP_011544138.1 integrin alpha-D isoform X2
- UniProtKB/TrEMBL
-
Q59H14
- Conserved Domains (4) summary
-
- smart00191
Location:464 → 520
- Int_alpha; Integrin alpha (beta-propellor repeats)
- cd01469
Location:149 → 324
- vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
- pfam00357
Location:1152 → 1166
- Integrin_alpha; Integrin alpha cytoplasmic region
- pfam08441
Location:627 → 932
- Integrin_alpha2; Integrin alpha
-
XM_011545838.3 → XP_011544140.1 integrin alpha-D isoform X4
- UniProtKB/TrEMBL
-
Q59H14
- Conserved Domains (4) summary
-
- smart00191
Location:453 → 495
- Int_alpha; Integrin alpha (beta-propellor repeats)
- cd01469
Location:149 → 324
- vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
- pfam00357
Location:1142 → 1156
- Integrin_alpha; Integrin alpha cytoplasmic region
- pfam08441
Location:617 → 922
- Integrin_alpha2; Integrin alpha
-
XM_047434071.1 → XP_047290027.1 integrin alpha-D isoform X8
- UniProtKB/TrEMBL
-
Q59H14
-
XM_011545841.3 → XP_011544143.1 integrin alpha-D isoform X7
- UniProtKB/TrEMBL
-
Q59H14
- Conserved Domains (4) summary
-
- smart00191
Location:453 → 509
- Int_alpha; Integrin alpha (beta-propellor repeats)
- cd01469
Location:149 → 324
- vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
- pfam00357
Location:1123 → 1137
- Integrin_alpha; Integrin alpha cytoplasmic region
- pfam08441
Location:616 → 956
- Integrin_alpha2; Integrin alpha
-
XM_011545842.4 → XP_011544144.1 integrin alpha-D isoform X9
- UniProtKB/TrEMBL
-
Q59H14
- Conserved Domains (4) summary
-
- smart00191
Location:377 → 419
- Int_alpha; Integrin alpha (beta-propellor repeats)
- cd01469
Location:149 → 324
- vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
- pfam00357
Location:1066 → 1080
- Integrin_alpha; Integrin alpha cytoplasmic region
- pfam08441
Location:541 → 846
- Integrin_alpha2; Integrin alpha
-
XM_011545847.4 → XP_011544149.1 integrin alpha-D isoform X14
- Conserved Domains (2) summary
-
- cd01469
Location:149 → 324
- vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
- pfam00357
Location:741 → 755
- Integrin_alpha; Integrin alpha cytoplasmic region
-
XM_011545843.4 → XP_011544145.1 integrin alpha-D isoform X10
- UniProtKB/TrEMBL
-
Q59H14
- Conserved Domains (3) summary
-
- smart00191
Location:464 → 506
- Int_alpha; Integrin alpha (beta-propellor repeats)
- cd01469
Location:149 → 324
- vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
- pfam08441
Location:628 → 933
- Integrin_alpha2; Integrin alpha
-
XM_011545845.4 → XP_011544147.1 integrin alpha-D isoform X12
- Conserved Domains (2) summary
-
- smart00191
Location:464 → 506
- Int_alpha; Integrin alpha (beta-propellor repeats)
- cd01469
Location:149 → 324
- vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
-
XM_011545848.4 → XP_011544150.1 integrin alpha-D isoform X15
- Conserved Domains (2) summary
-
- smart00191
Location:464 → 506
- Int_alpha; Integrin alpha (beta-propellor repeats)
- cd01469
Location:149 → 324
- vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
-
XM_011545846.4 → XP_011544148.1 integrin alpha-D isoform X13
- Conserved Domains (2) summary
-
- smart00191
Location:464 → 506
- Int_alpha; Integrin alpha (beta-propellor repeats)
- cd01469
Location:149 → 324
- vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
RNA
-
XR_950791.3 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060940.1 Alternate T2T-CHM13v2.0
- Range
-
31780736..31813905
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054380250.1 → XP_054236225.1 integrin alpha-D isoform X1
- UniProtKB/TrEMBL
-
Q59H14
-
XM_054380255.1 → XP_054236230.1 integrin alpha-D isoform X6
- UniProtKB/TrEMBL
-
Q59H14
-
XM_054380254.1 → XP_054236229.1 integrin alpha-D isoform X5
- UniProtKB/TrEMBL
-
Q59H14
-
XM_054380252.1 → XP_054236227.1 integrin alpha-D isoform X3
- UniProtKB/TrEMBL
-
Q59H14
-
XM_054380260.1 → XP_054236235.1 integrin alpha-D isoform X11
- UniProtKB/TrEMBL
-
Q59H14
-
XM_054380251.1 → XP_054236226.1 integrin alpha-D isoform X2
- UniProtKB/TrEMBL
-
Q59H14
-
XM_054380253.1 → XP_054236228.1 integrin alpha-D isoform X4
- UniProtKB/TrEMBL
-
Q59H14
-
XM_054380257.1 → XP_054236232.1 integrin alpha-D isoform X8
- UniProtKB/TrEMBL
-
Q59H14
-
XM_054380256.1 → XP_054236231.1 integrin alpha-D isoform X7
- UniProtKB/TrEMBL
-
Q59H14
-
XM_054380258.1 → XP_054236233.1 integrin alpha-D isoform X9
- UniProtKB/TrEMBL
-
Q59H14
-
XM_054380263.1 → XP_054236238.1 integrin alpha-D isoform X14
-
XM_054380259.1 → XP_054236234.1 integrin alpha-D isoform X10
- UniProtKB/TrEMBL
-
Q59H14
-
XM_054380261.1 → XP_054236236.1 integrin alpha-D isoform X12
-
XM_054380264.1 → XP_054236239.1 integrin alpha-D isoform X15
-
XM_054380262.1 → XP_054236237.1 integrin alpha-D isoform X13
RNA
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XR_008489085.1 RNA Sequence