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    LOC102548459 wiskott-Aldrich syndrome protein family member 1-like [ Rattus norvegicus (Norway rat) ]

    Gene ID: 102548459, updated on 17-Aug-2024

    Summary

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    Symbol
    LOC102548459provided by RGD
    Full Name
    wiskott-Aldrich syndrome protein family member 1-likeprovided by RGD
    Primary source
    RGD:7556929
    See related
    EnsemblRapid:ENSRNOG00000085045 AllianceGenome:RGD:7556929
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Thymus (RPKM 20.2), Spleen (RPKM 17.4) and 9 other tissues See more
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    Genomic context

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    See LOC102548459 in Genome Data Viewer
    Location:
    6q12
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (16582077..16589272, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (10829280..10831419, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (7072080..7075054)

    Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134479095 Neighboring gene uncharacterized LOC102548368 Neighboring gene transfer RNA isoleucine (anticodon UAU) 2 Neighboring gene uncharacterized LOC120093196 Neighboring gene 3-hydroxyanthranilate 3,4-dioxygenase Neighboring gene metastasis associated 1 family, member 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    actin-binding protein WASF1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086024.1 Reference GRCr8

      Range
      16582077..16589272 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039078117.2 → XP_038934045.1  actin-binding protein WASF1-like isoform X2

    2. XM_039078116.2 → XP_038934044.1  actin-binding protein WASF1-like isoform X1

    RNA

    1. XR_010052171.1 RNA Sequence

    2. XR_010052170.1 RNA Sequence

      Related
      ENSRNOT00000129790.1
    Nucleotide Protein Strain
    Heading Accession and Version

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