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    MXRA7 matrix remodeling associated 7 [ Homo sapiens (human) ]

    Gene ID: 439921, updated on 10-Dec-2024

    Summary

    Official Symbol
    MXRA7provided by HGNC
    Official Full Name
    matrix remodeling associated 7provided by HGNC
    Primary source
    HGNC:HGNC:7541
    See related
    Ensembl:ENSG00000182534 AllianceGenome:HGNC:7541
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    Located in endoplasmic reticulum. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Broad expression in heart (RPKM 51.6), thyroid (RPKM 40.4) and 22 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See MXRA7 in Genome Data Viewer
    Location:
    17q25.1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (76672551..76710965, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (77569376..77607924, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (74668633..74707047, complement)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene prothymosin alpha pseudogene 13 Neighboring gene RNA, U6 small nuclear 227, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:74666855-74667812 Neighboring gene uncharacterized LOC105274304 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:74678511-74679057 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:74680151-74680695 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:74682678-74683473 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:74693235-74693788 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:74693789-74694342 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:74694343-74694895 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:74696218-74696722 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:74696723-74697227 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:74697733-74698236 Neighboring gene RNY4 pseudogene 36 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9024 Neighboring gene jumonji domain containing 6, arginine demethylase and lysine hydroxylase Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:74722561-74723190 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:74723821-74724449 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:74725107-74725737 Neighboring gene methyltransferase 23, arginine Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:74732487-74733112 Neighboring gene serine and arginine rich splicing factor 2 Neighboring gene microRNA 636

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • FLJ41492, FLJ46603

    General protein information

    Preferred Names
    matrix-remodeling-associated protein 7
    Names
    matrix-remodelling associated 7

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001008528.3NP_001008528.1  matrix-remodeling-associated protein 7 isoform 1

      See identical proteins and their annotated locations for NP_001008528.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) encodes isoform 1.
      Source sequence(s)
      AC005837, AW297080, BC053983, CK300836
      Consensus CDS
      CCDS32745.1
      UniProtKB/Swiss-Prot
      P84157, Q0P5W3
      Related
      ENSP00000348050.2, ENST00000355797.7
      Conserved Domains (1) summary
      PHA03247
      Location:5298
      PHA03247; large tegument protein UL36; Provisional
    2. NM_001008529.3NP_001008529.1  matrix-remodeling-associated protein 7 isoform 2

      See identical proteins and their annotated locations for NP_001008529.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) contains alternate 3' exon structure, and it thus differs in the 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (2) has a distinct C-terminus and is shorter than isoform 1.
      Source sequence(s)
      AC005837, AK128460, AL046940, AW166143, BC053983
      Consensus CDS
      CCDS32746.1
      UniProtKB/Swiss-Prot
      P84157
      UniProtKB/TrEMBL
      Q6ZR64
      Related
      ENSP00000364176.1, ENST00000375036.6
      Conserved Domains (1) summary
      PHA03247
      Location:5298
      PHA03247; large tegument protein UL36; Provisional
    3. NM_001363769.2NP_001350698.1  matrix-remodeling-associated protein 7 isoform 4

      Status: VALIDATED

      Source sequence(s)
      AC005837
      Consensus CDS
      CCDS86640.1
      UniProtKB/TrEMBL
      Q6ZR64
      Related
      ENSP00000465103.1, ENST00000592148.1
    4. NM_001387276.1NP_001374205.1  matrix-remodeling-associated protein 7 isoform 5

      Status: VALIDATED

      Description
      Transcript Variant: This variant (8) represents the longest transcript and encodes the longest isoform (5).
      Source sequence(s)
      AC005837
    5. NM_001387277.1NP_001374206.1  matrix-remodeling-associated protein 7 isoform 6

      Status: VALIDATED

      Source sequence(s)
      AC005837
    6. NM_001387278.1NP_001374207.1  matrix-remodeling-associated protein 7 isoform 7

      Status: VALIDATED

      Source sequence(s)
      AC005837
    7. NM_198530.4NP_940932.2  matrix-remodeling-associated protein 7 isoform 3

      See identical proteins and their annotated locations for NP_940932.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) contains an alternate 3' terminal exon, and it thus differs in the 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (3) has a distinct C-terminus and is shorter than isoform 1.
      Source sequence(s)
      AC005837, AL046940, BC053983
      Consensus CDS
      CCDS45786.1
      UniProtKB/Swiss-Prot
      P84157
      Related
      ENSP00000391466.1, ENST00000449428.7

    RNA

    1. NR_130926.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC005837
    2. NR_130927.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC005837
    3. NR_130928.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC005837

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      76672551..76710965 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047436104.1XP_047292060.1  matrix-remodeling-associated protein 7 isoform X1

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      77569376..77607924 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054316196.1XP_054172171.1  matrix-remodeling-associated protein 7 isoform X1