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    FRG1EP FSHD region gene 1 family member E, pseudogene [ Homo sapiens (human) ]

    Gene ID: 102723390, updated on 10-Dec-2024

    Summary

    Official Symbol
    FRG1EPprovided by HGNC
    Official Full Name
    FSHD region gene 1 family member E, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:51764
    See related
    AllianceGenome:HGNC:51764
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See FRG1EP in Genome Data Viewer
    Location:
    20q11.1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (29475879..29497334, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (31108149..31129603, complement)

    Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene angiogenic factor with G-patch and FHA domains 1 pseudogene 10 Neighboring gene uncharacterized LOC105379477 Neighboring gene double homeobox 4 like 35 (pseudogene) Neighboring gene family with sequence similarity 242 member B Neighboring gene CFTR pseudogene 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_146067.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      ABBA01031664

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

      Range
      29475879..29497334 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060944.1 Alternate T2T-CHM13v2.0

      Range
      31108149..31129603 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_042232.1: Suppressed sequence

      Description
      NG_042232.1: This RefSeq was removed because it is now thought that this locus is transcribed.