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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001302485.1 → NP_001289414.1 granzyme M isoform 2 precursor
See identical proteins and their annotated locations for NP_001289414.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) utilizes an alternate in-frame splice site in the 5' coding region. This results in a shorter protein (isoform 2), compared to isoform 1.
- Source sequence(s)
-
AC151828, BG082217, CD742060
- UniProtKB/TrEMBL
-
B7ZP17
- Conserved Domains (2) summary
-
- smart00020
Location:26 → 250
- Tryp_SPc; Trypsin-like serine protease
- cd00190
Location:26 → 253
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
-
NM_001302499.2 → NP_001289428.1 granzyme M isoform 3
See identical proteins and their annotated locations for NP_001289428.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) contains a distinct 5' UTR, lacks exons in the coding region, and utilizes a downstream start codon compared to variant 1. It encodes isoform 3, which is shorter than isoform 1. Variants 3 and 6-9 all encode the same isoform (3).
- Source sequence(s)
-
AC151828
- UniProtKB/TrEMBL
-
Q9R1W7
- Related
-
ENSMUST00000151213.2
- Conserved Domains (1) summary
-
- cl21584
Location:2 → 100
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
-
NM_001428556.1 → NP_001415485.1 granzyme M isoform 4
Status: REVIEWED
- Source sequence(s)
-
AC151828
-
NM_001428558.1 → NP_001415487.1 granzyme M isoform 3
Status: REVIEWED
- Source sequence(s)
-
AC151828
- UniProtKB/TrEMBL
-
Q9R1W7
-
NM_001428559.1 → NP_001415488.1 granzyme M isoform 3
Status: REVIEWED
- Source sequence(s)
-
AC151828
- UniProtKB/TrEMBL
-
Q9R1W7
-
NM_001428560.1 → NP_001415489.1 granzyme M isoform 3
Status: REVIEWED
- Source sequence(s)
-
AC151828
- UniProtKB/TrEMBL
-
Q9R1W7
-
NM_001428561.1 → NP_001415490.1 granzyme M isoform 3
Status: REVIEWED
- Source sequence(s)
-
AC151828
- UniProtKB/TrEMBL
-
Q9R1W7
-
NM_008504.3 → NP_032530.1 granzyme M isoform 1 precursor
See identical proteins and their annotated locations for NP_032530.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC151828, BG082217, CD742060
- Consensus CDS
-
CCDS23984.1
- UniProtKB/TrEMBL
-
O08643
- Related
- ENSMUSP00000020549.3, ENSMUST00000020549.4
- Conserved Domains (2) summary
-
- smart00020
Location:27 → 251
- Tryp_SPc; Trypsin-like serine protease
- cd00190
Location:27 → 254
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
RNA
-
NR_126325.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an internal exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC151828, BE859680, BG082217, CD742060
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000076.7 Reference GRCm39 C57BL/6J
- Range
-
79524854..79531095
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017313816.3 → XP_017169305.1 granzyme M isoform X1
- Conserved Domains (1) summary
-
- cl21584
Location:2 → 100
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
-
XM_006513277.4 → XP_006513340.1 granzyme M isoform X1
- Conserved Domains (1) summary
-
- cl21584
Location:2 → 100
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...