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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001278221.3 → NP_001265150.1 PHD finger protein 7 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 3' coding region, compared to variant 1. It encodes isoform 2 which is shorter than isoform 1.
- Source sequence(s)
-
AY014283, BC022002, BG704704, BG723964, BU853281
- Consensus CDS
-
CCDS2855.1
- UniProtKB/TrEMBL
- A8K856, Q53EV8
- Related
- ENSP00000246282.4, ENST00000347025.6
- Conserved Domains (2) summary
-
- cd15669
Location:33 → 144
- ePHD_PHF7_G2E3_like; Extended PHD finger found in PHD finger protein 7 (PHF7) and G2/M phase-specific E3 ubiquitin-protein ligase (G2E3)
- cl22851
Location:225 → 261
- PHD_SF; PHD finger superfamily
-
NM_001321126.2 → NP_001308055.1 PHD finger protein 7 isoform 1
Status: REVIEWED
- Source sequence(s)
-
AK292221, AY014283, BC022002, BG704704
- Consensus CDS
-
CCDS2854.1
- UniProtKB/Swiss-Prot
- K4DI82, Q9BWX1
- UniProtKB/TrEMBL
- A0A024R336, A0A140VK34, A8K856, Q53EV8
- Related
- ENSP00000417712.1, ENST00000461861.5
- Conserved Domains (2) summary
-
- cd15496
Location:247 → 300
- PHD_PHF7_G2E3_like; PHD finger found in PHD finger protein 7 (PHF7) and G2/M phase-specific E3 ubiquitin-protein ligase (G2E3)
- cd15669
Location:33 → 144
- ePHD_PHF7_G2E3_like; Extended PHD finger found in PHD finger protein 7 (PHF7) and G2/M phase-specific E3 ubiquitin-protein ligase (G2E3)
-
NM_001321127.2 → NP_001308056.1 PHD finger protein 7 isoform 1
Status: REVIEWED
- Source sequence(s)
-
AK292221, AY014283, BC022002, BG704704, BQ669125
- Consensus CDS
-
CCDS2854.1
- UniProtKB/Swiss-Prot
- K4DI82, Q9BWX1
- UniProtKB/TrEMBL
- A0A024R336, A0A140VK34, A8K856, Q53EV8
- Conserved Domains (2) summary
-
- cd15496
Location:247 → 300
- PHD_PHF7_G2E3_like; PHD finger found in PHD finger protein 7 (PHF7) and G2/M phase-specific E3 ubiquitin-protein ligase (G2E3)
- cd15669
Location:33 → 144
- ePHD_PHF7_G2E3_like; Extended PHD finger found in PHD finger protein 7 (PHF7) and G2/M phase-specific E3 ubiquitin-protein ligase (G2E3)
-
NM_016483.7 → NP_057567.3 PHD finger protein 7 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AY014283, BC022002, BG704704
- Consensus CDS
-
CCDS2854.1
- UniProtKB/Swiss-Prot
- K4DI82, Q9BWX1
- UniProtKB/TrEMBL
- A0A024R336, A0A140VK34, A8K856, Q53EV8
- Related
- ENSP00000333024.3, ENST00000327906.8
- Conserved Domains (2) summary
-
- cd15496
Location:247 → 300
- PHD_PHF7_G2E3_like; PHD finger found in PHD finger protein 7 (PHF7) and G2/M phase-specific E3 ubiquitin-protein ligase (G2E3)
- cd15669
Location:33 → 144
- ePHD_PHF7_G2E3_like; Extended PHD finger found in PHD finger protein 7 (PHF7) and G2/M phase-specific E3 ubiquitin-protein ligase (G2E3)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
52410660..52423641
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_024453589.2 → XP_024309357.1 PHD finger protein 7 isoform X1
- UniProtKB/Swiss-Prot
- K4DI82, Q9BWX1
- UniProtKB/TrEMBL
- A0A024R336, A0A140VK34, A8K856, Q53EV8
- Conserved Domains (2) summary
-
- cd15496
Location:247 → 300
- PHD_PHF7_G2E3_like; PHD finger found in PHD finger protein 7 (PHF7) and G2/M phase-specific E3 ubiquitin-protein ligase (G2E3)
- cd15669
Location:33 → 144
- ePHD_PHF7_G2E3_like; Extended PHD finger found in PHD finger protein 7 (PHF7) and G2/M phase-specific E3 ubiquitin-protein ligase (G2E3)
-
XM_047448296.1 → XP_047304252.1 PHD finger protein 7 isoform X3
-
XM_047448295.1 → XP_047304251.1 PHD finger protein 7 isoform X2
- UniProtKB/TrEMBL
- A8K856, Q53EV8
-
XM_011533826.4 → XP_011532128.1 PHD finger protein 7 isoform X3
- Conserved Domains (1) summary
-
- cd15669
Location:33 → 144
- ePHD_PHF7_G2E3_like; Extended PHD finger found in PHD finger protein 7 (PHF7) and G2/M phase-specific E3 ubiquitin-protein ligase (G2E3)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
52443570..52456620
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054346814.1 → XP_054202789.1 PHD finger protein 7 isoform X1
- UniProtKB/Swiss-Prot
- K4DI82, Q9BWX1
- UniProtKB/TrEMBL
- A0A024R336, A0A140VK34, A8K856, Q53EV8
-
XM_054346817.1 → XP_054202792.1 PHD finger protein 7 isoform X3
-
XM_054346815.1 → XP_054202790.1 PHD finger protein 7 isoform X2
- UniProtKB/TrEMBL
- A8K856, Q53EV8
-
XM_054346816.1 → XP_054202791.1 PHD finger protein 7 isoform X3
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_173341.1: Suppressed sequence
- Description
- NM_173341.1: This RefSeq was permanently suppressed because currently there is support for the protein but not for the 5' UTR of the transcript.