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    Ifrd2 interferon-related developmental regulator 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 300994, updated on 9-Dec-2024

    Summary

    Official Symbol
    Ifrd2provided by RGD
    Official Full Name
    interferon-related developmental regulator 2provided by RGD
    Primary source
    RGD:1310222
    See related
    EnsemblRapid:ENSRNOG00000016150 AllianceGenome:RGD:1310222
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable ribosome binding activity and translation repressor activity. Predicted to be involved in negative regulation of translation. Orthologous to human IFRD2 (interferon related developmental regulator 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Muscle (RPKM 119.6), Spleen (RPKM 117.9) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Ifrd2 in Genome Data Viewer
    Location:
    8q32
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (117139612..117144834)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (108260969..108266191)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (116343096..116348318)

    Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene hyaluronidase 2 Neighboring gene hyaluronidase 1 Neighboring gene N(alpha)-acetyltransferase 80, NatH catalytic subunit Neighboring gene hyaluronidase 3 Neighboring gene leucine-rich single-pass membrane protein 2 Neighboring gene semaphorin 3B Neighboring gene uncharacterized LOC120094260 Neighboring gene G protein subunit alpha i2

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    interferon-related developmental regulator 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001047871.1NP_001041336.1  interferon-related developmental regulator 2

      See identical proteins and their annotated locations for NP_001041336.1

      Status: PROVISIONAL

      Source sequence(s)
      DQ480751
      UniProtKB/TrEMBL
      A0A8I6A4D6, A6I2Y9, B1WBM5, Q0ZFS6
      Related
      ENSRNOP00000022092.5, ENSRNOT00000022092.7
      Conserved Domains (2) summary
      pfam04836
      Location:385438
      IFRD_C; Interferon-related protein conserved region
      pfam05004
      Location:32340
      IFRD; Interferon-related developmental regulator (IFRD)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086026.1 Reference GRCr8

      Range
      117139612..117144834
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)