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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_017308.1 → NP_059004.1 semaphorin-6C precursor
See identical proteins and their annotated locations for NP_059004.1
Status: PROVISIONAL
- Source sequence(s)
-
AB000817
- UniProtKB/Swiss-Prot
- Q9WTL3, Q9WTM6
- UniProtKB/TrEMBL
- A6K2V3, A6K2W3, A6K2W4, Q8R4U4
- Related
- ENSRNOP00000071511.1, ENSRNOT00000090729.3
- Conserved Domains (3) summary
-
- PHA03307
Location:730 → 956
- PHA03307; transcriptional regulator ICP4; Provisional
- pfam01437
Location:517 → 538
- PSI; Plexin repeat
- cl15693
Location:52 → 516
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086020.1 Reference GRCr8
- Range
-
185422636..185436237
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017590804.3 → XP_017446293.1 semaphorin-6C isoform X1
- UniProtKB/Swiss-Prot
- Q9WTL3, Q9WTM6
- UniProtKB/TrEMBL
- A6K2V3, A6K2W3, A6K2W4, Q8R4U4
- Related
- ENSRNOP00000050221.1, ENSRNOT00000050914.5
- Conserved Domains (3) summary
-
- PHA03307
Location:730 → 956
- PHA03307; transcriptional regulator ICP4; Provisional
- pfam01437
Location:517 → 538
- PSI; Plexin repeat
- cl15693
Location:52 → 516
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_017590800.3 → XP_017446289.1 semaphorin-6C isoform X1
- UniProtKB/Swiss-Prot
- Q9WTL3, Q9WTM6
- UniProtKB/TrEMBL
- A6K2V3, A6K2W3, A6K2W4, Q8R4U4
- Conserved Domains (3) summary
-
- PHA03307
Location:730 → 956
- PHA03307; transcriptional regulator ICP4; Provisional
- pfam01437
Location:517 → 538
- PSI; Plexin repeat
- cl15693
Location:52 → 516
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_039102126.2 → XP_038958054.1 semaphorin-6C isoform X1
- UniProtKB/Swiss-Prot
- Q9WTL3, Q9WTM6
- UniProtKB/TrEMBL
- A6K2V3, A6K2W3, A6K2W4, Q8R4U4
- Conserved Domains (3) summary
-
- PHA03307
Location:730 → 956
- PHA03307; transcriptional regulator ICP4; Provisional
- pfam01437
Location:517 → 538
- PSI; Plexin repeat
- cl15693
Location:52 → 516
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_006232858.5 → XP_006232920.1 semaphorin-6C isoform X1
See identical proteins and their annotated locations for XP_006232920.1
- UniProtKB/Swiss-Prot
- Q9WTL3, Q9WTM6
- UniProtKB/TrEMBL
- A6K2V3, A6K2W3, A6K2W4, Q8R4U4
- Conserved Domains (3) summary
-
- PHA03307
Location:730 → 956
- PHA03307; transcriptional regulator ICP4; Provisional
- pfam01437
Location:517 → 538
- PSI; Plexin repeat
- cl15693
Location:52 → 516
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_063281681.1 → XP_063137751.1 semaphorin-6C isoform X2
- UniProtKB/TrEMBL
- A6K2W1, A6K2W3, A6K2W4, Q8R4U4
-
XM_008761293.4 → XP_008759515.1 semaphorin-6C isoform X1
See identical proteins and their annotated locations for XP_008759515.1
- UniProtKB/Swiss-Prot
- Q9WTL3, Q9WTM6
- UniProtKB/TrEMBL
- A6K2V3, A6K2W3, A6K2W4, Q8R4U4
- Conserved Domains (3) summary
-
- PHA03307
Location:730 → 956
- PHA03307; transcriptional regulator ICP4; Provisional
- pfam01437
Location:517 → 538
- PSI; Plexin repeat
- cl15693
Location:52 → 516
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_006232861.5 → XP_006232923.1 semaphorin-6C isoform X1
See identical proteins and their annotated locations for XP_006232923.1
- UniProtKB/Swiss-Prot
- Q9WTL3, Q9WTM6
- UniProtKB/TrEMBL
- A6K2V3, A6K2W3, A6K2W4, Q8R4U4
- Conserved Domains (3) summary
-
- PHA03307
Location:730 → 956
- PHA03307; transcriptional regulator ICP4; Provisional
- pfam01437
Location:517 → 538
- PSI; Plexin repeat
- cl15693
Location:52 → 516
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_017590802.3 → XP_017446291.1 semaphorin-6C isoform X1
- UniProtKB/Swiss-Prot
- Q9WTL3, Q9WTM6
- UniProtKB/TrEMBL
- A6K2V3, A6K2W3, A6K2W4, Q8R4U4
- Conserved Domains (3) summary
-
- PHA03307
Location:730 → 956
- PHA03307; transcriptional regulator ICP4; Provisional
- pfam01437
Location:517 → 538
- PSI; Plexin repeat
- cl15693
Location:52 → 516
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_017590806.3 → XP_017446295.1 semaphorin-6C isoform X1
- UniProtKB/Swiss-Prot
- Q9WTL3, Q9WTM6
- UniProtKB/TrEMBL
- A6K2V3, A6K2W3, A6K2W4, Q8R4U4
- Conserved Domains (3) summary
-
- PHA03307
Location:730 → 956
- PHA03307; transcriptional regulator ICP4; Provisional
- pfam01437
Location:517 → 538
- PSI; Plexin repeat
- cl15693
Location:52 → 516
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_017590807.3 → XP_017446296.1 semaphorin-6C isoform X1
- UniProtKB/Swiss-Prot
- Q9WTL3, Q9WTM6
- UniProtKB/TrEMBL
- A6K2V3, A6K2W3, A6K2W4, Q8R4U4
- Conserved Domains (3) summary
-
- PHA03307
Location:730 → 956
- PHA03307; transcriptional regulator ICP4; Provisional
- pfam01437
Location:517 → 538
- PSI; Plexin repeat
- cl15693
Location:52 → 516
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_017590809.3 → XP_017446298.1 semaphorin-6C isoform X1
- UniProtKB/Swiss-Prot
- Q9WTL3, Q9WTM6
- UniProtKB/TrEMBL
- A6K2V3, A6K2W3, A6K2W4, Q8R4U4
- Conserved Domains (3) summary
-
- PHA03307
Location:730 → 956
- PHA03307; transcriptional regulator ICP4; Provisional
- pfam01437
Location:517 → 538
- PSI; Plexin repeat
- cl15693
Location:52 → 516
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_039102128.2 → XP_038958056.1 semaphorin-6C isoform X1
- UniProtKB/Swiss-Prot
- Q9WTL3, Q9WTM6
- UniProtKB/TrEMBL
- A6K2V3, A6K2W3, A6K2W4, Q8R4U4
- Conserved Domains (3) summary
-
- PHA03307
Location:730 → 956
- PHA03307; transcriptional regulator ICP4; Provisional
- pfam01437
Location:517 → 538
- PSI; Plexin repeat
- cl15693
Location:52 → 516
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_017590808.3 → XP_017446297.1 semaphorin-6C isoform X1
- UniProtKB/Swiss-Prot
- Q9WTL3, Q9WTM6
- UniProtKB/TrEMBL
- A6K2V3, A6K2W3, A6K2W4, Q8R4U4
- Conserved Domains (3) summary
-
- PHA03307
Location:730 → 956
- PHA03307; transcriptional regulator ICP4; Provisional
- pfam01437
Location:517 → 538
- PSI; Plexin repeat
- cl15693
Location:52 → 516
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_006232869.5 → XP_006232931.1 semaphorin-6C isoform X3
- UniProtKB/TrEMBL
- A6K2W3, A6K2W4, Q8R4U4
- Conserved Domains (2) summary
-
- pfam01437
Location:472 → 493
- PSI; Plexin repeat
- cl15693
Location:32 → 471
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins