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    OR4D9 olfactory receptor family 4 subfamily D member 9 [ Homo sapiens (human) ]

    Gene ID: 390199, updated on 10-Dec-2024

    Summary

    Official Symbol
    OR4D9provided by HGNC
    Official Full Name
    olfactory receptor family 4 subfamily D member 9provided by HGNC
    Primary source
    HGNC:HGNC:15178
    See related
    Ensembl:ENSG00000172742 AllianceGenome:HGNC:15178
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    OR11-253
    Summary
    Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
    Orthologs
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    Genomic context

    See OR4D9 in Genome Data Viewer
    Location:
    11q12.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (59511539..59520703)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (59462418..59471582)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (59279012..59288176)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene olfactory receptor family 4 subfamily D member 11 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:59293606-59293887 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr11:59295867-59296368 Neighboring gene olfactory receptor family 4 subfamily D member 7 pseudogene Neighboring gene uncharacterized LOC102723575 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4755 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr11:59312511-59313710 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4756 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:59318146-59318647 Neighboring gene tRNA-Val (anticodon TAC) 1-1

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    olfactory receptor 4D9
    Names
    olfactory receptor OR11-253
    olfactory receptor, family 4, subfamily D, member 9 pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001004711.2NP_001004711.1  olfactory receptor 4D9

      See identical proteins and their annotated locations for NP_001004711.1

      Status: VALIDATED

      Source sequence(s)
      AP003778
      Consensus CDS
      CCDS31564.1
      UniProtKB/Swiss-Prot
      Q6IFF3, Q8NGE8
      UniProtKB/TrEMBL
      A0A126GVP8
      Related
      ENSP00000493010.1, ENST00000641962.1
      Conserved Domains (2) summary
      pfam00001
      Location:41287
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:33301
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      59511539..59520703
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      59462418..59471582
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)