NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_034190.1 RefSeqGene
- Range
-
5018..211189
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001128159.3 → NP_001121631.1 vacuolar protein sorting-associated protein 53 homolog isoform 1
See identical proteins and their annotated locations for NP_001121631.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and it encodes the longer protein (isoform 1).
- Source sequence(s)
-
AC015853, AK001841, AK092532, AL701573, EU021218
- Consensus CDS
-
CCDS45558.1
- UniProtKB/Swiss-Prot
- A8K2S8, B3FH42, Q5VIR6, Q8WYW3, Q9BRR2, Q9BY02, Q9NV25
- UniProtKB/TrEMBL
-
A0A7P0Z400
- Related
- ENSP00000401435.2, ENST00000437048.7
- Conserved Domains (1) summary
-
- pfam04100
Location:39 → 453
- Vps53_N; Vps53-like, N-terminal
-
NM_001366253.2 → NP_001353182.1 vacuolar protein sorting-associated protein 53 homolog isoform 3
Status: REVIEWED
- Source sequence(s)
-
AC015853, AC027455
- Consensus CDS
-
CCDS92214.1
- UniProtKB/TrEMBL
-
B1AA17
- Related
- ENSP00000459312.1, ENST00000571805.6
- Conserved Domains (1) summary
-
- pfam04100
Location:39 → 453
- Vps53_N; Vps53-like, N-terminal
-
NM_001366254.2 → NP_001353183.1 vacuolar protein sorting-associated protein 53 homolog isoform 4
Status: REVIEWED
- Source sequence(s)
-
AC015853, AC027455
- UniProtKB/TrEMBL
-
B3KS06
- Related
- ENSP00000506052.1, ENST00000681096.1
- Conserved Domains (1) summary
-
- pfam04100
Location:6 → 255
- Vps53_N; Vps53-like, N-terminal
-
NM_018289.4 → NP_060759.2 vacuolar protein sorting-associated protein 53 homolog isoform 2
See identical proteins and their annotated locations for NP_060759.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) has multiple differences in the coding region and uses a different segment for its 3' UTR but maintains the reading frame, compared to variant 1. The resulting protein (isoform 2) has a shorter and distinct C-terminus when it is compared to isoform 2.
- Source sequence(s)
-
AC015853, AK001841, AK092532, AK290343
- Consensus CDS
-
CCDS10995.1
- UniProtKB/TrEMBL
-
B1AA17
- Related
- ENSP00000291074.5, ENST00000291074.10
- Conserved Domains (1) summary
-
- pfam04100
Location:39 → 424
- Vps53_N; Vps53-like, N-terminal
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000017.11 Reference GRCh38.p14 Primary Assembly
- Range
-
508668..714839 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047436345.1 → XP_047292301.1 vacuolar protein sorting-associated protein 53 homolog isoform X2
- UniProtKB/TrEMBL
-
A0A7P0Z400
-
XM_047436344.1 → XP_047292300.1 vacuolar protein sorting-associated protein 53 homolog isoform X1
- UniProtKB/Swiss-Prot
- A8K2S8, B3FH42, Q5VIR6, Q8WYW3, Q9BRR2, Q9BY02, Q9NV25
- UniProtKB/TrEMBL
-
A0A7P0Z400
- Related
- ENSP00000505997.1, ENST00000680465.1
-
XM_047436346.1 → XP_047292302.1 vacuolar protein sorting-associated protein 53 homolog isoform X3
- UniProtKB/TrEMBL
-
A0A7P0Z400
- Related
- ENSP00000505594.1, ENST00000681510.1
-
XM_047436347.1 → XP_047292303.1 vacuolar protein sorting-associated protein 53 homolog isoform X4
- UniProtKB/TrEMBL
-
A0A7P0Z400
-
XM_047436348.1 → XP_047292304.1 vacuolar protein sorting-associated protein 53 homolog isoform X5
- UniProtKB/TrEMBL
-
A0A7P0Z400
-
XM_047436349.1 → XP_047292305.1 vacuolar protein sorting-associated protein 53 homolog isoform X6
- UniProtKB/TrEMBL
-
A0A7P0Z400
-
XM_047436351.1 → XP_047292307.1 vacuolar protein sorting-associated protein 53 homolog isoform X8
- UniProtKB/TrEMBL
-
A0A7P0TB80
- Related
- ENSP00000506475.1, ENST00000681133.1
-
XM_047436350.1 → XP_047292306.1 vacuolar protein sorting-associated protein 53 homolog isoform X7
- UniProtKB/TrEMBL
-
A0A7P0TB80
Reference GRCh38.p14 PATCHES
Genomic
-
NW_017363817.1 Reference GRCh38.p14 PATCHES
- Range
-
68145..274316 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054332081.1 → XP_054188056.1 vacuolar protein sorting-associated protein 53 homolog isoform X2
- UniProtKB/TrEMBL
-
A0A7P0Z400
-
XM_054332080.1 → XP_054188055.1 vacuolar protein sorting-associated protein 53 homolog isoform X1
- UniProtKB/Swiss-Prot
- A8K2S8, B3FH42, Q5VIR6, Q8WYW3, Q9BRR2, Q9BY02, Q9NV25
- UniProtKB/TrEMBL
-
A0A7P0Z400
-
XM_054332082.1 → XP_054188057.1 vacuolar protein sorting-associated protein 53 homolog isoform X3
- UniProtKB/TrEMBL
-
A0A7P0Z400
-
XM_054332083.1 → XP_054188058.1 vacuolar protein sorting-associated protein 53 homolog isoform X4
- UniProtKB/TrEMBL
-
A0A7P0Z400
-
XM_054332084.1 → XP_054188059.1 vacuolar protein sorting-associated protein 53 homolog isoform X5
- UniProtKB/TrEMBL
-
A0A7P0Z400
-
XM_054332085.1 → XP_054188060.1 vacuolar protein sorting-associated protein 53 homolog isoform X6
- UniProtKB/TrEMBL
-
A0A7P0Z400
-
XM_054332087.1 → XP_054188062.1 vacuolar protein sorting-associated protein 53 homolog isoform X8
- UniProtKB/TrEMBL
-
A0A7P0TB80
-
XM_054332086.1 → XP_054188061.1 vacuolar protein sorting-associated protein 53 homolog isoform X7
- UniProtKB/TrEMBL
-
A0A7P0TB80
Alternate T2T-CHM13v2.0
Genomic
-
NC_060941.1 Alternate T2T-CHM13v2.0
- Range
-
391960..599311 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054316606.1 → XP_054172581.1 vacuolar protein sorting-associated protein 53 homolog isoform X2
- UniProtKB/TrEMBL
-
A0A7P0Z400
-
XM_054316605.1 → XP_054172580.1 vacuolar protein sorting-associated protein 53 homolog isoform X1
- UniProtKB/Swiss-Prot
- A8K2S8, B3FH42, Q5VIR6, Q8WYW3, Q9BRR2, Q9BY02, Q9NV25
- UniProtKB/TrEMBL
-
A0A7P0Z400
-
XM_054316607.1 → XP_054172582.1 vacuolar protein sorting-associated protein 53 homolog isoform X3
- UniProtKB/TrEMBL
-
A0A7P0Z400
-
XM_054316608.1 → XP_054172583.1 vacuolar protein sorting-associated protein 53 homolog isoform X4
- UniProtKB/TrEMBL
-
A0A7P0Z400
-
XM_054316609.1 → XP_054172584.1 vacuolar protein sorting-associated protein 53 homolog isoform X5
- UniProtKB/TrEMBL
-
A0A7P0Z400
-
XM_054316610.1 → XP_054172585.1 vacuolar protein sorting-associated protein 53 homolog isoform X6
- UniProtKB/TrEMBL
-
A0A7P0Z400
-
XM_054316612.1 → XP_054172587.1 vacuolar protein sorting-associated protein 53 homolog isoform X8
- UniProtKB/TrEMBL
-
A0A7P0TB80
-
XM_054316611.1 → XP_054172586.1 vacuolar protein sorting-associated protein 53 homolog isoform X7
- UniProtKB/TrEMBL
-
A0A7P0TB80