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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_044984.2 RefSeqGene
- Range
-
51701..76733
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_1053
mRNA and Protein(s)
-
NM_001195007.2 → NP_001181936.1 peptidyl-prolyl cis-trans isomerase E isoform 4
See identical proteins and their annotated locations for NP_001181936.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 3' coding region and 3' UTR, compared to variant 1. The resulting isoform (4) has a distinct C-terminus and is longer than isoform 1.
- Source sequence(s)
-
AL049824, BU689929, DA079924, DQ160195
- Consensus CDS
-
CCDS53299.1
- UniProtKB/TrEMBL
-
A8KAM9
- Related
- ENSP00000361918.1, ENST00000372830.5
- Conserved Domains (3) summary
-
- COG0724
Location:5 → 84
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd01926
Location:140 → 279
- cyclophilin_ABH_like; cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which ...
- cd12347
Location:8 → 80
- RRM_PPIE; RNA recognition motif in cyclophilin-33 (Cyp33) and similar proteins
-
NM_001319293.2 → NP_001306222.1 peptidyl-prolyl cis-trans isomerase E isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) uses an alternate in-frame splice junction and differs in the 3' UTR and coding sequence compared to variant 1. The resulting isoform (5) lacks an alternate internal segment and has a shorter and distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
CA445146, CT002466, DA079924
- UniProtKB/TrEMBL
-
A8KAM9
- Conserved Domains (3) summary
-
- COG0724
Location:5 → 84
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd01926
Location:129 → 268
- cyclophilin_ABH_like; cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which ...
- cd12347
Location:8 → 80
- RRM_PPIE; RNA recognition motif in cyclophilin-33 (Cyp33) and similar proteins
-
NM_006112.4 → NP_006103.1 peptidyl-prolyl cis-trans isomerase E isoform 1
See identical proteins and their annotated locations for NP_006103.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes isoform 1.
- Source sequence(s)
-
AL049824, BC004898, CK300365, DA079924
- Consensus CDS
-
CCDS443.1
- UniProtKB/Swiss-Prot
- B2R971, O43634, O43635, Q32Q72, Q3S611, Q5TGA0, Q5TGA2, Q5TGA3, Q9UIZ5, Q9UNP9
- UniProtKB/TrEMBL
-
A8KAM9
- Related
- ENSP00000312769.5, ENST00000324379.10
- Conserved Domains (2) summary
-
- cd01926
Location:140 → 298
- cyclophilin_ABH_like; Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which accelerates protein folding ...
- cd12347
Location:8 → 82
- RRM_PPIE; RNA recognition motif (RRM) found in cyclophilin-33 (Cyp33) and similar proteins
-
NM_203456.3 → NP_982281.1 peptidyl-prolyl cis-trans isomerase E isoform 2
See identical proteins and their annotated locations for NP_982281.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate 3' exon and thereby differs in the 3' coding region and 3' UTR, compared to variant 1. The resulting isoform (2) has a distinct and shorter C-terminus, compared to isoform 1.
- Source sequence(s)
-
AF042386, BU689929, DA079924
- Consensus CDS
-
CCDS442.1
- UniProtKB/TrEMBL
-
A8KAM9
- Related
- ENSP00000348904.2, ENST00000356511.6
- Conserved Domains (2) summary
-
- cd01926
Location:140 → 281
- cyclophilin_ABH_like; Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which accelerates protein folding ...
- cd12347
Location:8 → 82
- RRM_PPIE; RNA recognition motif (RRM) found in cyclophilin-33 (Cyp33) and similar proteins
RNA
-
NR_036543.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate splice site in the 5'-most exon, compared to variant 1. This variant is represented as non-coding because the use of the supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL049824, BU160972, CK300365, DA079924
-
NR_036544.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) uses alternate splice sites in the 5'-most exon and in an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK304694, AL049824, CK300365, DA079924
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
39738882..39763914
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047430138.1 → XP_047286094.1 peptidyl-prolyl cis-trans isomerase E isoform X4
- UniProtKB/TrEMBL
-
E9PKY5
- Related
- ENSP00000433475.1, ENST00000497370.5
-
XM_017000051.3 → XP_016855540.1 peptidyl-prolyl cis-trans isomerase E isoform X1
- UniProtKB/TrEMBL
-
A8KAM9
- Conserved Domains (3) summary
-
- COG0724
Location:5 → 84
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd01926
Location:140 → 279
- cyclophilin_ABH_like; cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which ...
- cd12347
Location:8 → 80
- RRM_PPIE; RNA recognition motif in cyclophilin-33 (Cyp33) and similar proteins
-
XM_047430061.1 → XP_047286017.1 peptidyl-prolyl cis-trans isomerase E isoform X1
- UniProtKB/TrEMBL
-
A8KAM9
-
XM_047430098.1 → XP_047286054.1 peptidyl-prolyl cis-trans isomerase E isoform X2
- UniProtKB/TrEMBL
-
A8KAM9
-
XM_006710290.5 → XP_006710353.1 peptidyl-prolyl cis-trans isomerase E isoform X3
See identical proteins and their annotated locations for XP_006710353.1
- UniProtKB/TrEMBL
-
A8KAM9
- Conserved Domains (2) summary
-
- cd01926
Location:129 → 285
- cyclophilin_ABH_like; cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which ...
- cd12347
Location:8 → 80
- RRM_PPIE; RNA recognition motif in cyclophilin-33 (Cyp33) and similar proteins
-
XM_047430203.1 → XP_047286159.1 peptidyl-prolyl cis-trans isomerase E isoform X6
- UniProtKB/TrEMBL
-
E9PK21
- Related
- ENSP00000431714.1, ENST00000470213.5
-
XM_047430164.1 → XP_047286120.1 peptidyl-prolyl cis-trans isomerase E isoform X5
- UniProtKB/TrEMBL
-
E9PKY5
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
39608324..39633355
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054333831.1 → XP_054189806.1 peptidyl-prolyl cis-trans isomerase E isoform X1
- UniProtKB/TrEMBL
-
A8KAM9
-
XM_054333830.1 → XP_054189805.1 peptidyl-prolyl cis-trans isomerase E isoform X1
- UniProtKB/TrEMBL
-
A8KAM9
-
XM_054333832.1 → XP_054189807.1 peptidyl-prolyl cis-trans isomerase E isoform X2
- UniProtKB/TrEMBL
-
A8KAM9
-
XM_054333833.1 → XP_054189808.1 peptidyl-prolyl cis-trans isomerase E isoform X3
- UniProtKB/TrEMBL
-
A8KAM9
-
XM_054333835.1 → XP_054189810.1 peptidyl-prolyl cis-trans isomerase E isoform X6
- UniProtKB/TrEMBL
-
E9PK21
-
XM_054333834.1 → XP_054189809.1 peptidyl-prolyl cis-trans isomerase E isoform X5
- UniProtKB/TrEMBL
-
E9PKY5
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_203457.1: Suppressed sequence
- Description
- NM_203457.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.