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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_051812.1 RefSeqGene
- Range
-
5001..33648
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001145438.2 → NP_001138910.1 post-GPI attachment to proteins factor 2 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) contains alternate 5' exon structure and thus differs in the 5' UTR and 5' coding region, lacks an alternate in-frame exon in the central coding region, and uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. The encoded isoform (2) has a distinct and longer N-terminus but is overall shorter than isoform 1.
- Source sequence(s)
-
AF159615, AL096753, BC009930, DA287291
- Consensus CDS
-
CCDS44523.1
- UniProtKB/Swiss-Prot
-
Q9UHJ9
- Related
- ENSP00000300730.6, ENST00000300730.10
- Conserved Domains (1) summary
-
- pfam10277
Location:75 → 294
- Frag1; Frag1/DRAM/Sfk1 family
-
NM_001256235.1 → NP_001243164.1 post-GPI attachment to proteins factor 2 isoform 3
See identical proteins and their annotated locations for NP_001243164.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) contains alternate 5' exon structure and thus differs in the 5' UTR and 5' coding region, compared to variant 1. The encoded isoform (3) has a distinct N-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AF159615, AL096753
- Consensus CDS
-
CCDS73245.1
- UniProtKB/TrEMBL
-
A0A0A0MS75
- Related
- ENSP00000380188.3, ENST00000396991.6
- Conserved Domains (1) summary
-
- pfam10277
Location:75 → 259
- Frag1; Frag1/DRAM/Sfk1 family
-
NM_001256236.1 → NP_001243165.1 post-GPI attachment to proteins factor 2 isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) contains alternate 5' exon structure and thus differs in the 5' UTR and 5' coding region, compared to variant 1. The encoded isoform (4) has a distinct N-terminus and is longer than isoform 1.
- Source sequence(s)
-
AF159615, AK292181, AL096753, DA287291
- UniProtKB/Swiss-Prot
-
Q9UHJ9
- Conserved Domains (1) summary
-
- pfam10277
Location:136 → 359
- Frag1; Frag1/DRAM/Sfk1 family
-
NM_001256237.1 → NP_001243166.1 post-GPI attachment to proteins factor 2 isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) contains alternate 5' exon structure and thus differs in the 5' UTR and 5' coding region, lacks an alternate in-frame exon in the central coding region, and uses an alternate splice site that causes a frameshift in the 3' coding region, compared to variant 1. The encoded isoform (5) has distinct N- and C-termini and is shorter than isoform 1.
- Source sequence(s)
-
AF159615, AL096753, BG707484, BI772237, DA287291
- UniProtKB/Swiss-Prot
-
Q9UHJ9
- Conserved Domains (1) summary
-
- pfam10277
Location:75 → 235
- Frag1; Frag1/DRAM/Sfk1 family
-
NM_001256238.1 → NP_001243167.1 post-GPI attachment to proteins factor 2 isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (10) differs in the 5' UTR, lacks an alternate in-frame exon in the 5' coding region, and uses an alternate splice site that causes a frameshift in the 3' coding region, compared to variant 1. The encoded isoform (6) has a distinct C-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AF159615, AK295202, AL096753, BX379511
- Consensus CDS
-
CCDS58113.1
- UniProtKB/TrEMBL
-
H0YDJ5
- Related
- ENSP00000431851.1, ENST00000493547.6
- Conserved Domains (1) summary
-
- pfam10277
Location:18 → 178
- Frag1; Frag1/DRAM/Sfk1 family
-
NM_001256239.2 → NP_001243168.1 post-GPI attachment to proteins factor 2 isoform 7
See identical proteins and their annotated locations for NP_001243168.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (11) lacks an alternate in-frame exon in the 5' coding region, and uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. The encoded isoform (7) is shorter than isoform 1. Variants 11 and 27 both encode the same isoform (7).
- Source sequence(s)
-
AF159615, AL096753, BI911028, BX340489, CB988453
- UniProtKB/TrEMBL
- A0A0S2Z568, E9PQ19
- Related
- ENSP00000434507.1, ENST00000469307.4
- Conserved Domains (1) summary
-
- pfam10277
Location:18 → 237
- Frag1; Frag1/DRAM/Sfk1 family
-
NM_001256240.2 → NP_001243169.1 post-GPI attachment to proteins factor 2 isoform 8
See identical proteins and their annotated locations for NP_001243169.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (12) lacks an alternate in-frame exon in the 5' coding region, compared to variant 1, resulting in an isoform (8) that is shorter than isoform 1. Variants 12, 24, and 32 all encode the same isoform (8).
- Source sequence(s)
-
AF159615, AL096753, BI768071, CB988453
- Consensus CDS
-
CCDS58112.1
- UniProtKB/Swiss-Prot
- E9PJG5, H7BXL9, Q6UC77, Q96G66, Q9UF01, Q9UHJ9, Q9Y4N1
- UniProtKB/TrEMBL
- A0A024RCD5, E9PQ19
- Related
- ENSP00000435223.1, ENST00000463452.6
- Conserved Domains (1) summary
-
- pfam10277
Location:18 → 241
- Frag1; Frag1/DRAM/Sfk1 family
-
NM_001283038.1 → NP_001269967.1 post-GPI attachment to proteins factor 2 isoform 9
Status: REVIEWED
- Description
- Transcript Variant: This variant (17) contains an alternate 5' exon structure, and thus differs in the 5' UTR and 5' coding region, and lacks an alternate in-frame exon in the central coding region, compared to variant 1. The encoded isoform (9) has a longer N-terminus but is overall shorter than isoform 1.
- Source sequence(s)
-
AF159615, AL096753, BX356273, DA287291
- Consensus CDS
-
CCDS73244.1
- UniProtKB/TrEMBL
-
A8MYS5
- Related
- ENSP00000380183.2, ENST00000396986.6
- Conserved Domains (1) summary
-
- pfam10277
Location:75 → 298
- Frag1; Frag1/DRAM/Sfk1 family
-
NM_001283039.1 → NP_001269968.1 post-GPI attachment to proteins factor 2 isoform 10
Status: REVIEWED
- Description
- Transcript Variant: This variant (18) uses an alternate exon structure in the 5' region compared to variant 1. The encoded isoform (10) is distinct and shorter, compared to isoform 1, but it shares regions in common with isoforms 5 and 7.
- Source sequence(s)
-
AF159615, AK295202, AL096753, BX448155, CD675009, DA287291
- UniProtKB/Swiss-Prot
-
Q9UHJ9
- UniProtKB/TrEMBL
-
B7Z2X5
-
NM_001283040.1 → NP_001269969.1 post-GPI attachment to proteins factor 2 isoform 11
Status: REVIEWED
- Description
- Transcript Variant: This variant (19) uses an alternate exon structure in the 5' region compared to variant 1. The encoded isoform (11) is distinct and shorter, compared to isoform 1, but it shares regions in common with isoforms 5 and 7.
- Source sequence(s)
-
AC090587, AF159615, AL096753, DA287291, HY171112
- UniProtKB/Swiss-Prot
-
Q9UHJ9
-
NM_001346397.2 → NP_001333326.1 post-GPI attachment to proteins factor 2 isoform 12
Status: REVIEWED
- Source sequence(s)
-
AC090587
- UniProtKB/TrEMBL
-
E9PQ19
-
NM_001346398.2 → NP_001333327.1 post-GPI attachment to proteins factor 2 isoform 8
Status: REVIEWED
- Description
- Transcript Variant: This variant (24), as well as variants 12 and 32, encodes isoform 8.
- Source sequence(s)
-
AC090587
- Consensus CDS
-
CCDS58112.1
- UniProtKB/Swiss-Prot
- E9PJG5, H7BXL9, Q6UC77, Q96G66, Q9UF01, Q9UHJ9, Q9Y4N1
- UniProtKB/TrEMBL
- A0A024RCD5, E9PQ19
- Conserved Domains (1) summary
-
- pfam10277
Location:18 → 241
- Frag1; Frag1/DRAM/Sfk1 family
-
NM_001346399.2 → NP_001333328.1 post-GPI attachment to proteins factor 2 isoform 13
Status: REVIEWED
- Source sequence(s)
-
AC090587
- Consensus CDS
-
CCDS86172.1
- UniProtKB/TrEMBL
- B7Z2X5, H0YDC6
- Related
- ENSP00000433377.2, ENST00000532523.5
-
NM_001346400.2 → NP_001333329.1 post-GPI attachment to proteins factor 2 isoform 7
Status: REVIEWED
- Description
- Transcript Variant: This variant (27), as well as variant 11, encodes isoform 7.
- Source sequence(s)
-
AC090587
- UniProtKB/TrEMBL
- A0A0S2Z568, E9PQ19
- Conserved Domains (1) summary
-
- pfam10277
Location:18 → 237
- Frag1; Frag1/DRAM/Sfk1 family
-
NM_001346401.2 → NP_001333330.1 post-GPI attachment to proteins factor 2 isoform 14
Status: REVIEWED
- Source sequence(s)
-
AC090587
- UniProtKB/TrEMBL
-
H0YDC6
-
NM_001346402.2 → NP_001333331.1 post-GPI attachment to proteins factor 2 isoform 15
Status: REVIEWED
- Source sequence(s)
-
AC090587
-
NM_001346403.1 → NP_001333332.1 post-GPI attachment to proteins factor 2 isoform 16
Status: REVIEWED
- Source sequence(s)
-
AC090587
-
NM_001346404.1 → NP_001333333.1 post-GPI attachment to proteins factor 2 isoform 17
Status: REVIEWED
- Source sequence(s)
-
AC090587
- Consensus CDS
-
CCDS86171.1
- UniProtKB/TrEMBL
- H0YDJ5, H0YDQ4
- Related
- ENSP00000434088.2, ENST00000464261.5
-
NM_001346405.1 → NP_001333334.1 post-GPI attachment to proteins factor 2 isoform 8
Status: REVIEWED
- Description
- Transcript Variant: This variant (32), as well as variants 12 and 24, encodes isoform 8.
- Source sequence(s)
-
AC090587
- Consensus CDS
-
CCDS58112.1
- UniProtKB/Swiss-Prot
- E9PJG5, H7BXL9, Q6UC77, Q96G66, Q9UF01, Q9UHJ9, Q9Y4N1
- UniProtKB/TrEMBL
- A0A024RCD5, E9PQ19
- Conserved Domains (1) summary
-
- pfam10277
Location:18 → 241
- Frag1; Frag1/DRAM/Sfk1 family
-
NM_014489.4 → NP_055304.1 post-GPI attachment to proteins factor 2 isoform 1
See identical proteins and their annotated locations for NP_055304.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AF159615, AL096753
- Consensus CDS
-
CCDS7747.1
- Related
- ENSP00000278243.4, ENST00000278243.9
- Conserved Domains (1) summary
-
- pfam10277
Location:79 → 302
- Frag1; Frag1/DRAM/Sfk1 family
RNA
-
NR_027016.3 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) lacks two internal exons, compared to variant 1. This variant is represented as non-coding because it lacks a significant portion of the coding region, including the translational start codon, as found in variant 1.
- Source sequence(s)
-
AF159615, AL096753, CB988453, CX872317
- Related
-
ENST00000496834.6
-
NR_027017.4 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) uses alternate exon structure in both the 5' and 3' regions, compared to variant 1. This variant is represented as non-coding because translation of the predicted in-frame ORF renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC090587
-
NR_027018.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) uses alternate exon structure in both the 5' and central regions, compared to variant 1. This variant is represented as non-coding because it lacks a significant portion of the coding region, including the translational start codon, as found in variant 1.
- Source sequence(s)
-
AF159615, AK295202, AL096753
-
NR_045923.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses alternate exon structure in the 5' region, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported start codon, as used in variant 2, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AF159615, AK307359, AL096753, DA287291
- Related
-
ENST00000396993.8
-
NR_045925.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (13) uses alternate exon structure in both the 5' and 3' regions, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported start codon, as used in variant 2, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AF159615, AL096753, BG468212, DA287291
-
NR_045926.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (14) uses alternate exon structure in the 5' region, and lacks two exons in the central region, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported start codon, as used in variant 2, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AF159615, AL096753, AL558360, DA287291
- Related
-
ENST00000477358.6
-
NR_045927.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (15) uses alternate exon structure in the 5', central and 3' regions, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported start codon, as used in variant 2, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AF159615, AL096753, BG707484, DA287291
-
NR_045929.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (16) uses alternate exon structure in the 5', central and 3' regions, compared to variant 1. This variant is represented as non-coding because it lacks a significant portion of the coding region, including the translational start codon, as found in variant 1.
- Source sequence(s)
-
AF159615, AL096753, BI759334, CB988453
-
NR_104270.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (20) uses an alternate exon structure in the 5' and central regions and an alternate splice site in an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported start codon, as used in variant 2, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AF159615, AL096753, CD675113, DA287291
-
NR_104271.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (21) uses an alternate exon structure in the 5' and central regions and an alternate splice site in an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported start codon, as used in variant 2, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AF159615, AL096753, BI858175, BI911526, DA287291
- Related
-
ENST00000528216.5
-
NR_104272.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (22) lacks two alternate internal exons and uses an alternate splice site in an internal exon, compared to variant 1. This variant is represented as non-coding because it lacks a large portion of the coding region, including the translational start codon, found in variant 1.
- Source sequence(s)
-
AF159615, AL096753, CB988453
-
NR_144427.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC090587
-
NR_144428.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC090587
-
NR_144429.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC090587
-
NR_144430.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC090587