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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_011854.2 RefSeqGene
- Range
-
14450..229334
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001291866.2 → NP_001278795.1 polypeptide N-acetylgalactosaminyltransferase 2 isoform 2
See identical proteins and their annotated locations for NP_001278795.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and 5' coding region, compared to variant 1. The encoded isoform (2) has a shorter and distinct N-terminus, compared to isoform 2.
- Source sequence(s)
-
AK300453, BC050583, BE328743, X85019
- UniProtKB/TrEMBL
-
B7Z6K2
- Conserved Domains (3) summary
-
- cd02510
Location:101 → 396
- pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
- cd00161
Location:418 → 527
- RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
- pfam00652
Location:408 → 525
- Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
-
NM_004481.5 → NP_004472.1 polypeptide N-acetylgalactosaminyltransferase 2 precursor
See identical proteins and their annotated locations for NP_004472.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
BC041120, BC050583, BE328743, X85019
- Consensus CDS
-
CCDS1582.1
- UniProtKB/Swiss-Prot
- A8K1Y3, B7Z8V8, C5HU00, Q10471, Q9NPY4
- UniProtKB/TrEMBL
- A0A1L7NY41, A0A1L7NY50
- Related
- ENSP00000355632.4, ENST00000366672.5
- Conserved Domains (2) summary
-
- cd02510
Location:139 → 434
- pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
- pfam00652
Location:446 → 563
- Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
RNA
-
NR_120373.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks several exons and contains an alternate 3'-terminal exon. This variant is represented as non-coding because the predicted protein does not meet RefSeq quality criteria.
- Source sequence(s)
-
BC041120, BF727269
- Related
-
ENST00000488903.1
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
230057789..230282122
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017000964.3 → XP_016856453.2 polypeptide N-acetylgalactosaminyltransferase 2 isoform X1
- UniProtKB/TrEMBL
-
B7Z6K2
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
229437364..229661641
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054335859.1 → XP_054191834.1 polypeptide N-acetylgalactosaminyltransferase 2 isoform X1
- UniProtKB/TrEMBL
-
B7Z6K2