U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    aer2 aerotaxis transducer Aer2 [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 882219, updated on 10-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    aer2
    Gene description
    aerotaxis transducer Aer2
    Locus tag
    PA0176
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_002516.2 (199600..201639, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene chemotaxis protein methyltransferase Neighboring gene purine-binding chemotaxis protein Neighboring gene two-component sensor Neighboring gene two-component response regulator

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Gas Sensing and Signaling in the PAS-Heme Domain of the Pseudomonas aeruginosa Aer2 Receptor. Garcia D, et al. J Bacteriol, 2017 Sep 15. PMID 28167524, Free PMC Article
    2. PAS/poly-HAMP signalling in Aer-2, a soluble haem-based sensor. Watts KJ, et al. Mol Microbiol, 2011 Feb. PMID 21255112, Free PMC Article
    3. Chemotaxis proteins and transducers for aerotaxis in Pseudomonas aeruginosa. Hong CS, et al. FEMS Microbiol Lett, 2004 Feb 16. PMID 14987771
    4. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    5. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within aerotaxis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    aerotaxis transducer Aer2
    NP_248866.1
    • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      199600..201639 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_248866.1 aerotaxis transducer Aer2 [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_248866.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q9I6V6
      Conserved Domains (6) summary
      PRK15041
      Location:349 → 679
      PRK15041; methyl-accepting chemotaxis protein
      cd17529
      Location:11 → 55
      HAMP_I; first HAMP domain of aerotaxis transducer Aer2 and similar domains
      pfam13426
      Location:186 → 288
      PAS_9; PAS domain
      pfam18575
      Location:114 → 156
      HAMP_N3; HAMP N-terminal domain 3
      pfam18947
      Location:318 → 374
      HAMP_2; HAMP domain
      cl01054
      Location:66 → 111
      HAMP; Histidine kinase, Adenylyl cyclase, Methyl-accepting protein, and Phosphatase (HAMP) domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9I6V6.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases