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    cupA2 chaperone CupA2 [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 877904, updated on 24-Aug-2024

    Summary

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    Gene symbol
    cupA2
    Gene description
    chaperone CupA2
    Locus tag
    PA2129
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (2343132..2343878)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene fimbrial subunit CupA1 Neighboring gene usher CupA3 Neighboring gene fimbrial subunit CupA4 Neighboring gene chaperone CupA5 Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genes involved in matrix formation in Pseudomonas aeruginosa PA14 biofilms. Friedman L, et al. Mol Microbiol, 2004 Feb. PMID 14731271
    2. The chaperone/usher pathways of Pseudomonas aeruginosa: identification of fimbrial gene clusters (cup) and their involvement in biofilm formation. Vallet I, et al. Proc Natl Acad Sci U S A, 2001 Jun 5. PMID 11381121, Free PMC Article
    3. Responses of Pseudomonas aeruginosa to low oxygen indicate that growth in the cystic fibrosis lung is by aerobic respiration. Alvarez-Ortega C, et al. Mol Microbiol, 2007 Jul. PMID 17581126, Free PMC Article
    4. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    5. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within cell adhesion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within cellular response to oxygen levels IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in bacterial biofilm matrix IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chaperone CupA2
    NP_250819.1
    • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      2343132..2343878
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_250819.1 chaperone CupA2 [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_250819.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q9I1Y6
      Conserved Domains (1) summary
      COG3121
      Location:1 → 246
      FimC; P pilus assembly protein, chaperone PapD [Extracellular structures]
    Nucleotide Protein
    Heading Accession and Version

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