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    uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 852770, updated on 9-Dec-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    SGD:S000003076
    Locus tag
    YGL108C
    See related
    AllianceGenome:SGD:S000003076; FungiDB:YGL108C; VEuPathDB:YGL108C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in cytosol. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    Location:
    chromosome: VII
    Exon count:
    1
    Sequence:
    Chromosome: VII; NC_001139.9 (303649..304071, complement)

    Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene ribosome biosynthesis protein NSA1 Neighboring gene Cue3p Neighboring gene Rmd9p Neighboring gene Mlc1p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001139.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular recognition of the palmitoylation substrate Vac8 by its palmitoyltransferase Pfa3. Nadolski MJ, et al. J Biol Chem, 2009 Jun 26. PMID 19416974, Free PMC Article
    2. CSS-Palm 2.0: an updated software for palmitoylation sites prediction. Ren J, et al. Protein Eng Des Sel, 2008 Nov. PMID 18753194, Free PMC Article
    3. The nucleotide sequence of Saccharomyces cerevisiae chromosome VII. Tettelin H, et al. Nature, 1997 May 29. PMID 9169869
    4. Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Tkach JM, et al. Nat Cell Biol, 2012 Sep. PMID 22842922, Free PMC Article
    5. Defining potentially conserved RNA regulons of homologous zinc-finger RNA-binding proteins. Scherrer T, et al. Genome Biol, 2011. PMID 21232131, Free PMC Article

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytosol HDA PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_011407.3
    • hypothetical protein, predicted to be palmitoylated; SWAT-GFP, seamless-GFP and mCherry C-terminal fusion proteins localize to the cytosol, while N-terminal GFP fusion protein localizes to the cell periphery; protein abundance increases in response to DNA replication stress

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001139.9 Reference assembly

      Range
      303649..304071 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001180973.3 → NP_011407.3  TPA: uncharacterized protein YGL108C [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011407.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VU38, P53139
      UniProtKB/TrEMBL
      A6ZU73, B3LHH2, C8Z8E0, G2WDZ2, K4HWN2, K4HXW2, K4I8T3, N1P343
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P53139.1

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