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    Rgs16 regulator of G-protein signaling 16 [ Mus musculus (house mouse) ]

    Gene ID: 19734, updated on 27-Nov-2024

    Summary

    Official Symbol
    Rgs16provided by MGI
    Official Full Name
    regulator of G-protein signaling 16provided by MGI
    Primary source
    MGI:MGI:108407
    See related
    Ensembl:ENSMUSG00000026475 AllianceGenome:MGI:108407
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Rgsr; Rgs14
    Summary
    Enables GTPase activator activity. Involved in G protein-coupled receptor signaling pathway and positive regulation of GTPase activity. Located in membrane. Is expressed in several structures, including central nervous system; limb mesenchyme; lip; neural retina; and skeletal musculature. Orthologous to human RGS16 (regulator of G protein signaling 16). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in liver E18 (RPKM 12.8), CNS E11.5 (RPKM 10.4) and 15 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Rgs16 in Genome Data Viewer
    Location:
    1 G3; 1 65.43 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (153616099..153621212)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (153740353..153745468)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene regulator of G-protein signaling 8 Neighboring gene STARR-positive B cell enhancer mm9_chr1:155538364-155538664 Neighboring gene STARR-positive B cell enhancer mm9_chr1:155543174-155543475 Neighboring gene RIKEN cDNA C230024C17 gene Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:155593298-155593499 Neighboring gene STARR-positive B cell enhancer ABC_E5824 Neighboring gene STARR-positive B cell enhancer ABC_E9185 Neighboring gene STARR-positive B cell enhancer mm9_chr1:155598826-155599127 Neighboring gene ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) Neighboring gene regulator of G-protein signaling like 1 Neighboring gene predicted gene, 41974

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (5) 
    • Targeted (5)  1 citation

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables GTPase activator activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables GTPase activator activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables GTPase activator activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables GTPase activator activity TAS
    Traceable Author Statement
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm TAS
    Traceable Author Statement
    more info
    PubMed 
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    regulator of G-protein signaling 16
    Names
    A28-RGS14P
    RGS-R
    retinal-specific RGS
    retinally abundant regulator of G-protein signaling

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011267.4NP_035397.2  regulator of G-protein signaling 16

      See identical proteins and their annotated locations for NP_035397.2

      Status: VALIDATED

      Source sequence(s)
      AC154140
      Consensus CDS
      CCDS15376.1
      UniProtKB/Swiss-Prot
      O09091, P97420, P97428, Q80V16
      UniProtKB/TrEMBL
      Q542U0
      Related
      ENSMUSP00000027748.8, ENSMUST00000027748.8
      Conserved Domains (1) summary
      cd08710
      Location:65178
      RGS_RGS16; Regulator of G protein signaling (RGS) domain found in the RGS16 protein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      153616099..153621212
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)