U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Mrpl24 mitochondrial ribosomal protein L24 [ Mus musculus (house mouse) ]

    Gene ID: 67707, updated on 27-Nov-2024

    Summary

    Official Symbol
    Mrpl24provided by MGI
    Official Full Name
    mitochondrial ribosomal protein L24provided by MGI
    Primary source
    MGI:MGI:1914957
    See related
    Ensembl:ENSMUSG00000019710 AllianceGenome:MGI:1914957
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2010005E08Rik; 2810470K06Rik; 6720473G22Rik
    Summary
    Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Located in mitochondrion. Is expressed in several structures, including alimentary system; cerebral cortex; early conceptus; genitourinary system; and nasal cavity epithelium. Orthologous to human MRPL24 (mitochondrial ribosomal protein L24). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 19.7), bladder adult (RPKM 19.5) and 28 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Mrpl24 in Genome Data Viewer
    Location:
    3 F1; 3 38.78 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (87825438..87830757)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (87918131..87923450)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene papillary renal cell carcinoma (translocation-associated) Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:87689595-87689778 Neighboring gene STARR-seq mESC enhancer starr_08164 Neighboring gene STARR-seq mESC enhancer starr_08165 Neighboring gene heparin binding growth factor Neighboring gene STARR-positive B cell enhancer ABC_E10190 Neighboring gene methyltransferase like 25B Neighboring gene STARR-positive B cell enhancer ABC_E9556 Neighboring gene interferon stimulated exonuclease gene 20-like 2 Neighboring gene cellular retinoic acid binding protein II

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC7749, MGC25749, MGC38056

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in mitochondrial translation NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in translation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane NAS
    Non-traceable Author Statement
    more info
    PubMed 
    part_of mitochondrial large ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
     
    part_of mitochondrial large ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of mitochondrial large ribosomal subunit NAS
    Non-traceable Author Statement
    more info
    PubMed 
    located_in mitochondrion HDA PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    large ribosomal subunit protein uL24m
    Names
    39S ribosomal protein L24, mitochondrial
    L24mt
    MRP-L24

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026591.3NP_080867.2  large ribosomal subunit protein uL24m precursor

      See identical proteins and their annotated locations for NP_080867.2

      Status: PROVISIONAL

      Source sequence(s)
      AK019976
      Consensus CDS
      CCDS38477.1
      UniProtKB/Swiss-Prot
      Q9CQ06, Q9CX51, Q9D1L7, Q9D7R6
      Related
      ENSMUSP00000019854.7, ENSMUST00000019854.13
      Conserved Domains (1) summary
      cl00354
      Location:59154
      KOW; an acronym for the authors' surnames (Kyrpides, Ouzounis and Woese)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      87825438..87830757
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006501940.2XP_006502003.1  large ribosomal subunit protein uL24m isoform X1

      See identical proteins and their annotated locations for XP_006502003.1

      UniProtKB/Swiss-Prot
      Q9CQ06, Q9CX51, Q9D1L7, Q9D7R6
      Conserved Domains (1) summary
      cl00354
      Location:59154
      KOW; an acronym for the authors' surnames (Kyrpides, Ouzounis and Woese)
    2. XM_006501941.3XP_006502004.1  large ribosomal subunit protein uL24m isoform X1

      See identical proteins and their annotated locations for XP_006502004.1

      UniProtKB/Swiss-Prot
      Q9CQ06, Q9CX51, Q9D1L7, Q9D7R6
      Conserved Domains (1) summary
      cl00354
      Location:59154
      KOW; an acronym for the authors' surnames (Kyrpides, Ouzounis and Woese)
    3. XM_006501942.3XP_006502005.1  large ribosomal subunit protein uL24m isoform X1

      See identical proteins and their annotated locations for XP_006502005.1

      UniProtKB/Swiss-Prot
      Q9CQ06, Q9CX51, Q9D1L7, Q9D7R6
      Related
      ENSMUSP00000112885.2, ENSMUST00000121920.8
      Conserved Domains (1) summary
      cl00354
      Location:59154
      KOW; an acronym for the authors' surnames (Kyrpides, Ouzounis and Woese)